U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Mier1 MIER1 transcriptional regulator [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100723878, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Mier1
    Gene description
    MIER1 transcriptional regulator
    See related
    Ensembl:ENSCPOG00000014165
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Mier1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (161929764..161979740, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176417.1 (66153530..66203375, complement)

    NW_026947484.1Genomic Context describing neighboring genes Neighboring gene chromosome unknown C1orf141 homolog Neighboring gene solute carrier family 35 member D1 Neighboring gene uncharacterized LOC134478258 Neighboring gene dynein axonemal intermediate chain 4 Neighboring gene uncharacterized LOC134473460

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables histone deacetylase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transcription corepressor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    mesoderm induction early response protein 1
    Names
    mesoderm induction early response 1 homolog

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947484.1 Reference mCavPor4.1

      Range
      161929764..161979740 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003479106.4 → XP_003479154.2  mesoderm induction early response protein 1 isoform X8

      Conserved Domains (3) summary
      smart00717
      Location:409 → 454
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd11661
      Location:409 → 453
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:303 → 352
      ELM2; ELM2 domain

    2. XM_063258749.1 → XP_063114819.1  mesoderm induction early response protein 1 isoform X7

    3. XM_023561184.2 → XP_023416952.1  mesoderm induction early response protein 1 isoform X6

      Conserved Domains (2) summary
      cd11661
      Location:446 → 490
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:340 → 389
      ELM2; ELM2 domain

    4. XM_013142867.3 → XP_012998321.3  mesoderm induction early response protein 1 isoform X3

    5. XM_063258746.1 → XP_063114816.1  mesoderm induction early response protein 1 isoform X5

    6. XM_063258742.1 → XP_063114812.1  mesoderm induction early response protein 1 isoform X2

    7. XM_063258744.1 → XP_063114814.1  mesoderm induction early response protein 1 isoform X4

    8. XM_063258740.1 → XP_063114810.1  mesoderm induction early response protein 1 isoform X1

    9. XM_013142870.3 → XP_012998324.1  mesoderm induction early response protein 1 isoform X11

      Conserved Domains (3) summary
      smart00717
      Location:306 → 351
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd11661
      Location:306 → 350
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:200 → 249
      ELM2; ELM2 domain

    10. XM_063258788.1 → XP_063114858.1  mesoderm induction early response protein 1 isoform X14

    11. XM_005007939.4 → XP_005007996.1  mesoderm induction early response protein 1 isoform X12

      See identical proteins and their annotated locations for XP_005007996.1

      UniProtKB/TrEMBL
      H0VQE4
      Conserved Domains (3) summary
      smart00717
      Location:305 → 350
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd11661
      Location:305 → 349
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:199 → 248
      ELM2; ELM2 domain

    12. XM_063258753.1 → XP_063114823.1  mesoderm induction early response protein 1 isoform X9

    13. XM_005007938.4 → XP_005007995.1  mesoderm induction early response protein 1 isoform X12

      See identical proteins and their annotated locations for XP_005007995.1

      UniProtKB/TrEMBL
      H0VQE4
      Related
      ENSCPOP00000012761.3
      Conserved Domains (3) summary
      smart00717
      Location:305 → 350
      SANT; SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains
      cd11661
      Location:305 → 349
      SANT_MTA3_like; Myb-Like Dna-Binding Domain of MTA3 and related proteins
      pfam01448
      Location:199 → 248
      ELM2; ELM2 domain

    14. XM_063258761.1 → XP_063114831.1  mesoderm induction early response protein 1 isoform X10

    15. XM_063258785.1 → XP_063114855.1  mesoderm induction early response protein 1 isoform X13

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials