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    Tnnt1 troponin T1, slow skeletal type [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100720501, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tnnt1
    Gene description
    troponin T1, slow skeletal type
    See related
    Ensembl:ENSCPOG00000022114
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Tnnt1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947490.1 (36007916..36015192, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176349.1 (271130..277392)

    NW_026947490.1Genomic Context describing neighboring genes Neighboring gene EPS8 signaling adaptor L1 Neighboring gene protein phosphatase 1 regulatory subunit 12C Neighboring gene troponin I3, cardiac type Neighboring gene dynein axonemal assembly factor 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tropomyosin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables troponin T binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of muscle contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sarcomere organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in slow-twitch skeletal muscle fiber contraction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of troponin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    troponin T, slow skeletal muscle

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947490.1 Reference mCavPor4.1

      Range
      36007916..36015192 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023563139.2 → XP_023418907.1  troponin T, slow skeletal muscle isoform X2

      UniProtKB/TrEMBL
      A0A286XHE7
      Conserved Domains (1) summary
      pfam00992
      Location:70 → 206
      Troponin; Troponin

    2. XM_013147747.1 → XP_013003201.1  troponin T, slow skeletal muscle isoform X1

      UniProtKB/TrEMBL
      A0A286XHE7
      Conserved Domains (1) summary
      pfam00992
      Location:59 → 195
      Troponin; Troponin

    3. XM_063253305.1 → XP_063109375.1  troponin T, slow skeletal muscle isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials