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    Ppp1r10 protein phosphatase 1 regulatory subunit 10 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100720282, updated on 10-Oct-2024

    Summary

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    Gene symbol
    Ppp1r10
    Gene description
    protein phosphatase 1 regulatory subunit 10
    See related
    Ensembl:ENSCPOG00000015402
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Ppp1r10 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    19
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947511.1 (52060548..52073977)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176105.1 (143259..156582)

    NW_026947511.1Genomic Context describing neighboring genes Neighboring gene alpha tubulin acetyltransferase 1 Neighboring gene mitochondrial ribosomal protein S18B Neighboring gene ATP binding cassette subfamily F member 1 Neighboring gene proline rich 3

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein phosphatase 1 binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of PTW/PP1 phosphatase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of chromatin IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/threonine-protein phosphatase 1 regulatory subunit 10

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947511.1 Reference mCavPor4.1

      Range
      52060548..52073977
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_023562887.2 → XP_023418655.1  serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1

      UniProtKB/TrEMBL
      H0VT98
      Conserved Domains (3) summary
      smart00509
      Location:74 → 146
      TFS2N; Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)
      pfam00642
      Location:919 → 942
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
      cl26464
      Location:150 → 432
      Atrophin-1; Atrophin-1 family

    2. XM_063239266.1 → XP_063095336.1  serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X1

    3. XM_004999307.4 → XP_004999364.1  serine/threonine-protein phosphatase 1 regulatory subunit 10 isoform X2

      UniProtKB/TrEMBL
      H0VT98
      Related
      ENSCPOP00000013885.3
      Conserved Domains (2) summary
      smart00509
      Location:74 → 146
      TFS2N; Domain in the N-terminus of transcription elongation factor S-II (and elsewhere)
      pfam00642
      Location:907 → 930
      zf-CCCH; Zinc finger C-x8-C-x5-C-x3-H type (and similar)
    Nucleotide Protein
    Heading Accession and Version

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