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    Amotl1 angiomotin like 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100720059, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Amotl1
    Gene description
    angiomotin like 1
    See related
    Ensembl:ENSCPOG00000006241
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Amotl1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947492.1 (40509933..40661586, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176379.1 (226620..350238, complement)

    NW_026947492.1Genomic Context describing neighboring genes Neighboring gene CWC15 spliceosome associated protein homolog Neighboring gene uncharacterized LOC106027382 Neighboring gene piwi like RNA-mediated gene silencing 4 Neighboring gene fucosyltransferase 4 Neighboring gene ankyrin repeat domain 49

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in actin cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in angiogenesis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in establishment of cell polarity involved in ameboidal cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in hippo signaling IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cell migration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in bicellular tight junction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    angiomotin-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947492.1 Reference mCavPor4.1

      Range
      40509933..40661586 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063256213.1 → XP_063112283.1  angiomotin-like protein 1 isoform X3

    2. XM_013151134.3 → XP_013006588.1  angiomotin-like protein 1 isoform X3

      See identical proteins and their annotated locations for XP_013006588.1

      Conserved Domains (2) summary
      pfam12240
      Location:518 → 720
      Angiomotin_C; Angiomotin C terminal
      cl12013
      Location:380 → 552
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    3. XM_003468556.5 → XP_003468604.2  angiomotin-like protein 1 isoform X2

      UniProtKB/TrEMBL
      H0V7C4
      Related
      ENSCPOP00000005629.3
      Conserved Domains (2) summary
      pfam12240
      Location:604 → 806
      Angiomotin_C; Angiomotin C terminal
      cl12013
      Location:466 → 638
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    4. XM_013151132.3 → XP_013006586.1  angiomotin-like protein 1 isoform X3

      See identical proteins and their annotated locations for XP_013006586.1

      Conserved Domains (2) summary
      pfam12240
      Location:518 → 720
      Angiomotin_C; Angiomotin C terminal
      cl12013
      Location:380 → 552
      BAR; The Bin/Amphiphysin/Rvs (BAR) domain, a dimerization module that binds membranes and detects membrane curvature

    5. XM_063256212.1 → XP_063112282.1  angiomotin-like protein 1 isoform X1

    Nucleotide Protein
    Heading Accession and Version

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