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    Rab1a RAB1A, member RAS oncogene family [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100719957, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Rab1a
    Gene description
    RAB1A, member RAS oncogene family
    See related
    Ensembl:ENSCPOG00000015437
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Rab1a in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947501.1 (19751232..19790032, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176371.1 (338342..378248)

    NW_026947501.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC134471286 Neighboring gene small nucleolar RNA SNORA2/SNORA34 family Neighboring gene centrosomal protein 68 Neighboring gene glycoprotein integral membrane protein 1-like Neighboring gene large ribosomal subunit protein uL22-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables GTPase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in vesicle-mediated transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    LOW QUALITY PROTEIN: ras-related protein Rab-1A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947501.1 Reference mCavPor4.1

      Range
      19751232..19790032 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003467515.5 → XP_003467563.2  LOW QUALITY PROTEIN: ras-related protein Rab-1A

      UniProtKB/TrEMBL
      H0VS12
      Related
      ENSCPOP00000021697.1
      Conserved Domains (1) summary
      cd01869
      Location:10 → 175
      Rab1_Ypt1; Rab GTPase family 1 includes the yeast homolog Ypt1
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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