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    Tbxas1 thromboxane A synthase 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100719442, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Tbxas1
    Gene description
    thromboxane A synthase 1
    See related
    Ensembl:ENSCPOG00000000064
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Tbxas1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947489.1 (47320299..47478347)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176409.1 (8586847..8745010, complement)

    NW_026947489.1Genomic Context describing neighboring genes Neighboring gene C-type lectin domain family 2 member L Neighboring gene homeodomain interacting protein kinase 2 Neighboring gene uncharacterized LOC106028883 Neighboring gene uncharacterized LOC134476211 Neighboring gene poly(ADP-ribose) polymerase family member 12 Neighboring gene lysine demethylase 7A Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Involvement of thromboxane A(2) in airway mucous cells in asthma-related cough. Xiang A, et al. J Appl Physiol (1985), 2002 Feb. PMID 11796690
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables heme binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monooxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables thromboxane-A synthase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    thromboxane-A synthase
    Names
    thromboxane synthase

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947489.1 Reference mCavPor4.1

      Range
      47320299..47478347
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063249598.1 → XP_063105668.1  thromboxane-A synthase isoform X2

    2. XM_063249597.1 → XP_063105667.1  thromboxane-A synthase isoform X1

    3. XM_063249599.1 → XP_063105669.1  thromboxane-A synthase isoform X4

    4. XM_003475343.5 → XP_003475391.1  thromboxane-A synthase isoform X3

      UniProtKB/TrEMBL
      H0UT36
      Related
      ENSCPOP00000000056.3
      Conserved Domains (1) summary
      pfam00067
      Location:47 → 530
      p450; Cytochrome P450
    Nucleotide Protein
    Heading Accession and Version

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