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    Otud7b OTU deubiquitinase 7B [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100719181, updated on 6-Jun-2024

    Summary

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    Gene symbol
    Otud7b
    Gene description
    OTU deubiquitinase 7B
    See related
    Ensembl:ENSCPOG00000001517
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Otud7b in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (106894582..106958957, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176417.1 (11016375..11034258, complement)

    NW_026947484.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106025534 Neighboring gene splicing factor 3b subunit 4 Neighboring gene myotubularin related protein 11 Neighboring gene vacuolar protein sorting 45 homolog Neighboring gene uncharacterized LOC134476834 Neighboring gene R3H and coiled-coil domain-containing protein 1-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables K63-linked polyubiquitin modification-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K11-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K48-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein K63-linked deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein deubiquitination involved in ubiquitin-dependent protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    OTU domain-containing protein 7B
    Names
    OTU domain containing 7B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947484.1 Reference mCavPor4.1

      Range
      106894582..106958957 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063252474.1 → XP_063108544.1  OTU domain-containing protein 7B isoform X1

      UniProtKB/TrEMBL
      H0UWE2

    2. XM_063252468.1 → XP_063108538.1  OTU domain-containing protein 7B isoform X1

      UniProtKB/TrEMBL
      H0UWE2

    3. XM_063252481.1 → XP_063108551.1  OTU domain-containing protein 7B isoform X1

      UniProtKB/TrEMBL
      H0UWE2

    4. XM_063252485.1 → XP_063108555.1  OTU domain-containing protein 7B isoform X2

      UniProtKB/TrEMBL
      H0UWE2

    5. XM_063252488.1 → XP_063108558.1  OTU domain-containing protein 7B isoform X2

      UniProtKB/TrEMBL
      H0UWE2
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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    Molecular Biology Databases
    Research Materials