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    P4ha2 prolyl 4-hydroxylase subunit alpha 2 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100718564, updated on 6-Jun-2024

    Summary

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    Gene symbol
    P4ha2
    Gene description
    prolyl 4-hydroxylase subunit alpha 2
    See related
    Ensembl:ENSCPOG00000008411
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See P4ha2 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    18
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947502.1 (4227886..4261028, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176338.1 (1388988..1421749, complement)

    NW_026947502.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA synthetase long chain family member 6 Neighboring gene uncharacterized LOC134471577 Neighboring gene colony stimulating factor 2 Neighboring gene uncharacterized LOC134471578 Neighboring gene PDZ and LIM domain 4 Neighboring gene small Cajal body-specific RNA 24 Neighboring gene solute carrier family 22 member 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables L-ascorbic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables iron ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables procollagen-proline 4-dioxygenase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in peptidyl-proline hydroxylation to 4-hydroxy-L-proline IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    prolyl 4-hydroxylase subunit alpha-2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947502.1 Reference mCavPor4.1

      Range
      4227886..4261028 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063230584.1 → XP_063086654.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

      UniProtKB/TrEMBL
      H0VCB0

    2. XM_063230585.1 → XP_063086655.1  prolyl 4-hydroxylase subunit alpha-2 isoform X2

      UniProtKB/TrEMBL
      A0A286XCV7, A0A286XXT0

    3. XM_063230586.1 → XP_063086656.1  prolyl 4-hydroxylase subunit alpha-2 isoform X3

      UniProtKB/TrEMBL
      A0A286XCV7

    4. XM_013146745.3 → XP_013002199.1  prolyl 4-hydroxylase subunit alpha-2 isoform X1

      UniProtKB/TrEMBL
      H0VCB0
      Related
      ENSCPOP00000007562.3
      Conserved Domains (2) summary
      smart00702
      Location:352 → 525
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
      pfam08336
      Location:32 → 161
      P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region

    5. XM_013146744.3 → XP_013002198.2  prolyl 4-hydroxylase subunit alpha-2 isoform X1

      UniProtKB/TrEMBL
      H0VCB0
      Conserved Domains (2) summary
      smart00702
      Location:352 → 525
      P4Hc; Prolyl 4-hydroxylase alpha subunit homologues
      pfam08336
      Location:32 → 161
      P4Ha_N; Prolyl 4-Hydroxylase alpha-subunit, N-terminal region
    Nucleotide Protein
    Heading Accession and Version

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