U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    Peli3 pellino E3 ubiquitin protein ligase family member 3 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100716351, updated on 10-Oct-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    Peli3
    Gene description
    pellino E3 ubiquitin protein ligase family member 3
    See related
    Ensembl:ENSCPOG00000000688
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See Peli3 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947500.1 (25126231..25135702)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176377.1 (7063035..7072520)

    NW_026947500.1Genomic Context describing neighboring genes Neighboring gene neuronal PAS domain protein 4 Neighboring gene mitochondrial ribosomal protein L11 Neighboring gene dipeptidyl peptidase 3 Neighboring gene small ribosomal subunit protein eS27-like Neighboring gene Bardet-Biedl syndrome 1

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K63-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Toll signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    E3 ubiquitin-protein ligase pellino homolog 3

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947500.1 Reference mCavPor4.1

      Range
      25126231..25135702
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003468272.5 → XP_003468320.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X1

      UniProtKB/TrEMBL
      H0UUG9
      Conserved Domains (1) summary
      pfam04710
      Location:37 → 469
      Pellino; Pellino

    2. XM_063227572.1 → XP_063083642.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X3

    3. XM_063227571.1 → XP_063083641.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X2

      UniProtKB/TrEMBL
      A0A286XWT2

    4. XM_063227574.1 → XP_063083644.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X4

    5. XM_063227573.1 → XP_063083643.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X4

    6. XM_063227575.1 → XP_063083645.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X4

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials