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    Bpifa1 BPI fold containing family A member 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100715971, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Bpifa1
    Gene description
    BPI fold containing family A member 1
    See related
    Ensembl:ENSCPOG00000014220
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Bpifa1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947488.1 (28028056..28034813, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176374.1 (96866..103609)

    NW_026947488.1Genomic Context describing neighboring genes Neighboring gene putative elongation factor 1-alpha-like 3 Neighboring gene BPI fold containing family B member 1 Neighboring gene BPI fold containing family A member 3 Neighboring gene BPI fold containing family B member 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in antibacterial humoral response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in antimicrobial humoral immune response mediated by antimicrobial peptide IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in immune response in nasopharyngeal-associated lymphoid tissue IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in innate immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in negative regulation of single-species biofilm formation in or on host organism IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in surfactant homeostasis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    BPI fold-containing family A member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947488.1 Reference mCavPor4.1

      Range
      28028056..28034813 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013150240.2 → XP_013005694.1  BPI fold-containing family A member 1

      UniProtKB/TrEMBL
      H0VQI9
      Related
      ENSCPOP00000012812.3
      Conserved Domains (1) summary
      pfam01273
      Location:84 → 260
      LBP_BPI_CETP; LBP / BPI / CETP family, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials