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    B4galt6 beta-1,4-galactosyltransferase 6 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100715716, updated on 8-Mar-2024

    Summary

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    Gene symbol
    B4galt6
    Gene description
    beta-1,4-galactosyltransferase 6
    See related
    Ensembl:ENSCPOG00000039163
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See B4galt6 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947503.1 (50044806..50126903)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176405.1 (32156563..32238084)

    NW_026947503.1Genomic Context describing neighboring genes Neighboring gene uncharacterized protein C2orf78-like Neighboring gene NADH dehydrogenase [ubiquinone] flavoprotein 2, mitochondrial-like Neighboring gene transthyretin Neighboring gene desmoglein 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-galactose:glucosylceramide beta-1,4-galactosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in carbohydrate metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,4-galactosyltransferase 6

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947503.1 Reference mCavPor4.1

      Range
      50044806..50126903
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063231802.1 → XP_063087872.1  beta-1,4-galactosyltransferase 6 isoform X2

    2. XM_013157197.2 → XP_013012651.1  beta-1,4-galactosyltransferase 6 isoform X3

      Conserved Domains (1) summary
      cd00899
      Location:123 → 339
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

    3. XM_003474100.5 → XP_003474148.1  beta-1,4-galactosyltransferase 6 isoform X1

      UniProtKB/TrEMBL
      A0A286XF43
      Related
      ENSCPOP00000024088.1
      Conserved Domains (1) summary
      cd00899
      Location:155 → 371
      b4GalT; Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids
    Nucleotide Protein
    Heading Accession and Version

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