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    Dcaf7 DDB1 and CUL4 associated factor 7 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100715499, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Dcaf7
    Gene description
    DDB1 and CUL4 associated factor 7
    See related
    Ensembl:ENSCPOG00000030903
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Dcaf7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947515.1 (17223917..17254179, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176354.1 (4678515..4708769)

    NW_026947515.1Genomic Context describing neighboring genes Neighboring gene mitogen-activated protein kinase kinase kinase 3 Neighboring gene translational activator of cytochrome c oxidase 1 Neighboring gene uncharacterized LOC134474458 Neighboring gene potassium voltage-gated channel subfamily H member 6 Neighboring gene angiotensin-converting enzyme-like protein Ace3 Neighboring gene potassium voltage-gated channel subfamily H member 6-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DDB1- and CUL4-associated factor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947515.1 Reference mCavPor4.1

      Range
      17223917..17254179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003465922.5 → XP_003465970.1  DDB1- and CUL4-associated factor 7

      See identical proteins and their annotated locations for XP_003465970.1

      UniProtKB/TrEMBL
      A0A286XE78
      Related
      ENSCPOP00000023760.1
      Conserved Domains (2) summary
      sd00039
      Location:71 → 116
      7WD40; WD40 repeat [structural motif]
      cl29593
      Location:19 → 295
      WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

    RNA

    1. XR_216214.4 RNA Sequence

    2. XR_216213.4 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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