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    N6amt1 N-6 adenine-specific DNA methyltransferase 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100714564, updated on 8-Mar-2024

    Summary

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    Gene symbol
    N6amt1
    Gene description
    N-6 adenine-specific DNA methyltransferase 1
    See related
    Ensembl:ENSCPOG00000030645
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See N6amt1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947490.1 (9709881..9727524, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176367.1 (4773351..4790986, complement)

    NW_026947490.1Genomic Context describing neighboring genes Neighboring gene RWD domain containing 2B Neighboring gene listerin E3 ubiquitin protein ligase 1 Neighboring gene transfer RNA alanine (anticodon UGC) Neighboring gene uncharacterized LOC134476709 Neighboring gene small nucleolar RNA SNORA21

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables S-adenosylmethionine-dependent methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nucleic acid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein methyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in methylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of eRF1 methyltransferase complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    methyltransferase N6AMT1
    Names
    N-6 adenine-specific DNA methyltransferase 1 (putative)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947490.1 Reference mCavPor4.1

      Range
      9709881..9727524 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005002495.3 → XP_005002552.2  methyltransferase N6AMT1 isoform X1

      Conserved Domains (2) summary
      COG2890
      Location:69 → 212
      HemK; Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]
      cl17173
      Location:69 → 235
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

    2. XM_003467182.4 → XP_003467230.1  methyltransferase N6AMT1 isoform X2

      UniProtKB/TrEMBL
      A0A286XEF5
      Related
      ENSCPOP00000023743.1
      Conserved Domains (2) summary
      COG2890
      Location:20 → 190
      HemK; Methylase of polypeptide chain release factors [Translation, ribosomal structure and biogenesis]
      cl17173
      Location:21 → 213
      AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...
    Nucleotide Protein
    Heading Accession and Version

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