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    LOC100714188 asialoglycoprotein receptor 1 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100714188, updated on 3-Apr-2024

    Summary

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    Gene symbol
    LOC100714188
    Gene description
    asialoglycoprotein receptor 1
    See related
    Ensembl:ENSCPOG00000009813
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Also known as
    Asgr1
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    Genomic context

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    See LOC100714188 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947515.1 (36577470..36580912, complement)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176358.1 (9431615..9434856)

    NW_026947515.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC106026852 Neighboring gene asialoglycoprotein receptor 2 Neighboring gene discs large MAGUK scaffold protein 4 Neighboring gene acyl-CoA dehydrogenase very long chain

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    asialoglycoprotein receptor 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947515.1 Reference mCavPor4.1

      Range
      36577470..36580912 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_063242068.1 → XP_063098138.1  asialoglycoprotein receptor 1 isoform X1

      UniProtKB/TrEMBL
      H0VFG5

    2. XM_063242069.1 → XP_063098139.1  asialoglycoprotein receptor 1 isoform X2

    3. XM_003466184.5 → XP_003466232.1  asialoglycoprotein receptor 1 isoform X1

      UniProtKB/TrEMBL
      H0VFG5
      Related
      ENSCPOP00000008808.3
      Conserved Domains (2) summary
      cd03590
      Location:154 → 279
      CLECT_DC-SIGN_like; C-type lectin-like domain (CTLD) of the type found in human dendritic cell (DC)-specific intercellular adhesion molecule 3-grabbing non-integrin (DC-SIGN) and the related receptor, DC-SIGN receptor (DC-SIGNR)
      pfam03954
      Location:31 → 144
      Lectin_N; Hepatic lectin, N-terminal domain
    Nucleotide Protein
    Heading Accession and Version

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