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    Srsf7 serine and arginine rich splicing factor 7 [ Cavia porcellus (domestic guinea pig) ]

    Gene ID: 100714040, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Srsf7
    Gene description
    serine and arginine rich splicing factor 7
    See related
    Ensembl:ENSCPOG00000033318
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cavia porcellus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Caviidae; Cavia
    Orthologs
    human mouse all
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    Genomic context

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    See Srsf7 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2024_02 current mCavPor4.1 (GCF_034190915.1) Unplaced Scaffold NW_026947484.1 (219645165..219653147)
    103 previous assembly Cavpor3.0 (GCF_000151735.1) Unplaced Scaffold NT_176401.1 (23305996..23313934, complement)

    NW_026947484.1Genomic Context describing neighboring genes Neighboring gene gem nuclear organelle associated protein 6 Neighboring gene tetratricopeptide repeat protein 39B-like Neighboring gene galactose mutarotase Neighboring gene general transcription factor 3C polypeptide 6-like

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables mRNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in mRNA splicing, via spliceosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nuclear speck IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    serine/arginine-rich splicing factor 7

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_034190915.1-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference mCavPor4.1

    Genomic

    1. NW_026947484.1 Reference mCavPor4.1

      Range
      219645165..219653147
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005005054.4 → XP_005005111.1  serine/arginine-rich splicing factor 7 isoform X1

      See identical proteins and their annotated locations for XP_005005111.1

      UniProtKB/TrEMBL
      A0A286X9I9
      Related
      ENSCPOP00000022091.1
      Conserved Domains (1) summary
      cd12646
      Location:12 → 88
      RRM_SRSF7; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 7 (SRSF7)

    2. XM_023566359.2 → XP_023422127.1  serine/arginine-rich splicing factor 7 isoform X3

      Conserved Domains (1) summary
      cd12646
      Location:12 → 88
      RRM_SRSF7; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 7 (SRSF7)

    3. XM_003473036.5 → XP_003473084.1  serine/arginine-rich splicing factor 7 isoform X2

      See identical proteins and their annotated locations for XP_003473084.1

      Conserved Domains (1) summary
      cd12646
      Location:12 → 88
      RRM_SRSF7; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 7 (SRSF7)

    4. XM_023566360.2 → XP_023422128.1  serine/arginine-rich splicing factor 7 isoform X4

      Conserved Domains (1) summary
      cd12646
      Location:12 → 88
      RRM_SRSF7; RNA recognition motif (RRM) found in vertebrate serine/arginine-rich splicing factor 7 (SRSF7)
    Nucleotide Protein
    Heading Accession and Version

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