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    GABRB1 gamma-aminobutyric acid type A receptor subunit beta1 [ Canis lupus familiaris (dog) ]

    Gene ID: 100687745, updated on 8-Mar-2024

    Summary

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    Official Symbol
    GABRB1provided by VGNC
    Official Full Name
    gamma-aminobutyric acid type A receptor subunit beta1provided by VGNC
    Primary source
    VGNC:VGNC:41058
    See related
    Ensembl:ENSCAFG00845008573
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See GABRB1 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 13 NC_051817.1 (43598384..43955432)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 13 NC_006595.4 (42942633..43300315)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 13 NC_049234.1 (43691479..44049754)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 13 NC_049273.1 (43276378..43634632)

    Chromosome 13 - NC_051817.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111098609 Neighboring gene cytochrome c oxidase subunit VIIb2 Neighboring gene gamma-aminobutyric acid type A receptor subunit alpha4 Neighboring gene uncharacterized LOC119874451 Neighboring gene uncharacterized LOC119874453 Neighboring gene uncharacterized LOC119874452 Neighboring gene dynein light chain roadblock-type 2-like Neighboring gene uncharacterized LOC106559651 Neighboring gene uncharacterized LOC111098610 Neighboring gene COMM domain containing 8

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GABA-A receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables extracellular ligand-gated monoatomic ion channel activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables neurotransmitter receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in chemical synaptic transmission IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nervous system process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of membrane potential IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in signal transduction IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of GABA-A receptor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in neuron projection IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gamma-aminobutyric acid receptor subunit beta-1
    Names
    gamma-aminobutyric acid (GABA) A receptor, beta 1
    gamma-aminobutyric acid type A receptor beta1 subunit

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051817.1 Reference ROS_Cfam_1.0

      Range
      43598384..43955432
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038685556.1 → XP_038541484.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X2

      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 422
      LIC; Cation transporter family protein

    2. XM_038685555.1 → XP_038541483.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TSB9, A0A8C0Z659, A0A8I3MZR1
      Related
      ENSCAFP00845011701.1, ENSCAFT00845015078.1
      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 473
      LIC; Cation transporter family protein

    3. XM_038685558.1 → XP_038541486.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    4. XM_038685557.1 → XP_038541485.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049273.1 Alternate UMICH_Zoey_3.1

      Range
      43276378..43634632
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038493699.1 → XP_038349627.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X2

      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 422
      LIC; Cation transporter family protein

    2. XM_038493698.1 → XP_038349626.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X1

      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 473
      LIC; Cation transporter family protein

    3. XM_038493701.1 → XP_038349629.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    4. XM_038493700.1 → XP_038349628.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049234.1 Alternate UU_Cfam_GSD_1.0

      Range
      43691479..44049754
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038556012.1 → XP_038411940.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X2

      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 422
      LIC; Cation transporter family protein

    2. XM_038556011.1 → XP_038411939.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TSB9, A0A8C0Z659, A0A8I3MZR1
      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 473
      LIC; Cation transporter family protein

    3. XM_038556014.1 → XP_038411942.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    4. XM_038556013.1 → XP_038411941.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006595.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      42942633..43300315
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038688604.1 → XP_038544532.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X2

      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 422
      LIC; Cation transporter family protein

    2. XM_038688595.1 → XP_038544523.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X1

      UniProtKB/TrEMBL
      A0A8C0TSB9, A0A8C0Z659, A0A8I3MZR1
      Conserved Domains (1) summary
      TIGR00860
      Location:9 → 473
      LIC; Cation transporter family protein

    3. XM_038688618.1 → XP_038544546.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein

    4. XM_005628158.4 → XP_005628215.1  gamma-aminobutyric acid receptor subunit beta-1 isoform X3

      UniProtKB/TrEMBL
      F1PEG2
      Conserved Domains (1) summary
      TIGR00860
      Location:1 → 388
      LIC; Cation transporter family protein
    Nucleotide Protein
    Heading Accession and Version

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