U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ADAT2 adenosine deaminase tRNA specific 2 [ Canis lupus familiaris (dog) ]

    Gene ID: 100686906, updated on 17-Aug-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    ADAT2provided by VGNC
    Official Full Name
    adenosine deaminase tRNA specific 2provided by VGNC
    Primary source
    VGNC:VGNC:37614
    See related
    Ensembl:ENSCAFG00845011977
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ADAT2 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 1 NC_051805.1 (35128041..35169160, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 1 NC_006583.4 (35850889..35892217, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 1 NC_049222.1 (35191585..35232714, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 1 NC_049261.1 (34996392..35037497, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 1 NC_049742.1 (34879345..34920428, complement)

    Chromosome 1 - NC_051805.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111090660 Neighboring gene calmodulin-alpha-like Neighboring gene uncharacterized LOC111095543 Neighboring gene peroxisomal biogenesis factor 3 Neighboring gene alpha-L-fucosidase 2

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tRNA-specific adenosine-34 deaminase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in tRNA wobble adenosine to inosine editing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    tRNA-specific adenosine deaminase 2
    XP_013967952.1
    XP_038321509.1
    XP_038321510.1
    XP_038321511.1
    XP_038321512.1
    XP_038382148.1
    XP_038382149.1
    XP_038382150.1
    XP_038382151.1
    XP_038446438.1
    XP_038446439.1
    XP_038446440.1
    XP_038446441.1
    XP_038510269.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051805.1 Reference ROS_Cfam_1.0

      Range
      35128041..35169160 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038654341.1 → XP_038510269.1  tRNA-specific adenosine deaminase 2

      UniProtKB/TrEMBL
      A0A8C0RX36, A0A8I3RWU9, A0A8P0N3J8
      Related
      ENSCAFP00845016750.1, ENSCAFT00845021298.1
      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    RNA

    1. XR_005421134.1 RNA Sequence

    2. XR_005421133.1 RNA Sequence

    3. XR_005421136.1 RNA Sequence

    4. XR_005421135.1 RNA Sequence

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049261.1 Alternate UMICH_Zoey_3.1

      Range
      34996392..35037497 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038465582.1 → XP_038321510.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    2. XM_038465581.1 → XP_038321509.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    3. XM_038465584.1 → XP_038321512.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    4. XM_038465583.1 → XP_038321511.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049742.1 Alternate UNSW_CanFamBas_1.0

      Range
      34879345..34920428 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038590511.1 → XP_038446439.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    2. XM_038590510.1 → XP_038446438.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    3. XM_038590513.1 → XP_038446441.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    4. XM_038590512.1 → XP_038446440.1  tRNA-specific adenosine deaminase 2

      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049222.1 Alternate UU_Cfam_GSD_1.0

      Range
      35191585..35232714 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038526221.1 → XP_038382149.1  tRNA-specific adenosine deaminase 2

      UniProtKB/TrEMBL
      A0A8C0RX36, A0A8I3RWU9, A0A8P0N3J8
      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    2. XM_038526220.1 → XP_038382148.1  tRNA-specific adenosine deaminase 2

      UniProtKB/TrEMBL
      A0A8C0RX36, A0A8I3RWU9, A0A8P0N3J8
      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    3. XM_038526223.1 → XP_038382151.1  tRNA-specific adenosine deaminase 2

      UniProtKB/TrEMBL
      A0A8C0RX36, A0A8I3RWU9, A0A8P0N3J8
      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    4. XM_038526222.1 → XP_038382150.1  tRNA-specific adenosine deaminase 2

      UniProtKB/TrEMBL
      A0A8C0RX36, A0A8I3RWU9, A0A8P0N3J8
      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006583.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      35850889..35892217 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_014112477.3 → XP_013967952.1  tRNA-specific adenosine deaminase 2

      UniProtKB/TrEMBL
      A0A8C0RX36, A0A8I3RWU9, A0A8P0N3J8
      Conserved Domains (1) summary
      COG0590
      Location:17 → 174
      TadA; tRNA(Arg) A34 adenosine deaminase TadA [Translation, ribosomal structure and biogenesis]

    RNA

    1. XR_001315881.3 RNA Sequence

    2. XR_005341615.1 RNA Sequence

    3. XR_005341639.1 RNA Sequence

    4. XR_005341620.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials