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    PSMB7 proteasome 20S subunit beta 7 [ Canis lupus familiaris (dog) ]

    Gene ID: 100686423, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PSMB7provided by VGNC
    Official Full Name
    proteasome 20S subunit beta 7provided by VGNC
    Primary source
    VGNC:VGNC:55791
    See related
    Ensembl:ENSCAFG00845010709
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See PSMB7 in Genome Data Viewer
    Location:
    chromosome: 9
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 9 NC_051813.1 (59449060..59512699)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 9 NC_006591.4 (57726668..57789932)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 9 NC_049230.1 (58614281..58677679)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 9 NC_049269.1 (58207216..58270483)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 9 NC_049750.1 (58523766..58587042)

    Chromosome 9 - NC_051813.1Genomic Context describing neighboring genes Neighboring gene adhesion G-protein coupled receptor D2 Neighboring gene adhesion G protein-coupled receptor D2 Neighboring gene NIMA related kinase 6 Neighboring gene uncharacterized LOC119873443

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A missense mutation in the 20S proteasome β2 subunit of Great Danes having harlequin coat patterning. Clark LA, et al. Genomics, 2011 Apr. PMID 21256207
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables threonine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in proteolysis involved in protein catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of proteasome core complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    proteasome subunit beta type-7
    Names
    beta-type proteasome 7 subunit
    proteasome (prosome, macropain) subunit, beta type, 7
    proteasome subunit beta 7
    NP_001271382.1
    XP_038530827.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001284453.1 → NP_001271382.1  proteasome subunit beta type-7

      See identical proteins and their annotated locations for NP_001271382.1

      Status: PROVISIONAL

      Source sequence(s)
      GU305913
      UniProtKB/TrEMBL
      E7BUQ0
      Related
      ENSCAFP00845014790.1, ENSCAFT00845018928.1
      Conserved Domains (3) summary
      COG0638
      Location:7 → 236
      PRE1; 20S proteasome, alpha and beta subunits [Posttranslational modification, protein turnover, chaperones]
      cd03763
      Location:44 → 232
      proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
      pfam12465
      Location:236 → 271
      Pr_beta_C; Proteasome beta subunits C terminal

    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051813.1 Reference ROS_Cfam_1.0

      Range
      59449060..59512699
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038674899.1 → XP_038530827.1  proteasome subunit beta type-7 isoform X1

      UniProtKB/TrEMBL
      A0A8C0MIH2, A0A8I3N5F1
      Related
      ENSCAFP00845014752.1, ENSCAFT00845018883.1
      Conserved Domains (2) summary
      cd03763
      Location:44 → 270
      proteasome_beta_type_7; proteasome beta type-7 subunit. The 20S proteasome, multisubunit proteolytic complex, is the central enzyme of nonlysosomal protein degradation in both the cytosol and nucleus. It is composed of 28 subunits arranged as four homoheptameric rings that ...
      pfam12465
      Location:274 → 309
      Pr_beta_C; Proteasome beta subunits C terminal

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049269.1 Alternate UMICH_Zoey_3.1

      Range
      58207216..58270483
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049750.1 Alternate UNSW_CanFamBas_1.0

      Range
      58523766..58587042
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049230.1 Alternate UU_Cfam_GSD_1.0

      Range
      58614281..58677679
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006591.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      57726668..57789932
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein
    Heading Accession and Version

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