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    HOXA11 homeobox A11 [ Canis lupus familiaris (dog) ]

    Gene ID: 100683897, updated on 17-Aug-2024

    Summary

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    Official Symbol
    HOXA11provided by VGNC
    Official Full Name
    homeobox A11provided by VGNC
    Primary source
    VGNC:VGNC:41746
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    See HOXA11 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 14 NC_051818.1 (40294564..40298764, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 14 NC_006596.4 (39786761..39790944, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 14 NC_049235.1 (40452219..40456401, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 14 NC_049274.1 (40408521..40412708, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 14 NC_049755.1 (40093599..40097769, complement)

    Chromosome 14 - NC_051818.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC102156409 Neighboring gene homeobox A10 Neighboring gene uncharacterized LOC119867346 Neighboring gene homeobox A13

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in anatomical structure development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    homeobox protein Hox-A11

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051818.1 Reference ROS_Cfam_1.0

      Range
      40294564..40298764 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038686806.1 → XP_038542734.1  homeobox protein Hox-A11

      UniProtKB/TrEMBL
      A0A8C0S566, A0A8I3NQ00, A0A8P0N5Y2
      Conserved Domains (2) summary
      pfam00046
      Location:258 → 312
      Homeobox; Homeobox domain
      pfam12045
      Location:26 → 168
      DUF3528; Protein of unknown function (DUF3528)

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049274.1 Alternate UMICH_Zoey_3.1

      Range
      40408521..40412708 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038494914.1 → XP_038350842.1  homeobox protein Hox-A11

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049755.1 Alternate UNSW_CanFamBas_1.0

      Range
      40093599..40097769 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038621127.1 → XP_038477055.1  homeobox protein Hox-A11

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049235.1 Alternate UU_Cfam_GSD_1.0

      Range
      40452219..40456401 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038557187.1 → XP_038413115.1  homeobox protein Hox-A11

      UniProtKB/TrEMBL
      A0A8C0S566, A0A8I3NQ00, A0A8P0N5Y2

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006596.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      39786761..39790944 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003431923.6 → XP_003431971.3  homeobox protein Hox-A11

      UniProtKB/TrEMBL
      A0A8C0S566, A0A8I3NQ00, A0A8P0N5Y2
      Conserved Domains (2) summary
      pfam00046
      Location:257 → 311
      Homeobox; Homeobox domain
      pfam12045
      Location:26 → 168
      DUF3528; Protein of unknown function (DUF3528)
    Nucleotide Protein
    Heading Accession and Version

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