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    ZBTB8B zinc finger and BTB domain containing 8B [ Equus caballus (horse) ]

    Gene ID: 100630269, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ZBTB8Bprovided by VGNC
    Official Full Name
    zinc finger and BTB domain containing 8Bprovided by VGNC
    Primary source
    VGNC:VGNC:110134
    See related
    Ensembl:ENSECAG00000008368
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Equus caballus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Equidae; Equus
    Orthologs
    human mouse all
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    Genomic context

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    See ZBTB8B in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2024_08 current EquCab3.0 (GCF_002863925.1) 2 NC_009145.3 (24392772..24414188, complement)

    Chromosome 2 - NC_009145.3Genomic Context describing neighboring genes Neighboring gene zinc finger and BTB domain containing 8 opposite strand Neighboring gene zinc finger and BTB domain containing 8A Neighboring gene BSD domain containing 1 Neighboring gene testis specific serine kinase 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_009145.3 Chromosome 2 Reference EquCab3.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Annotation of the Protein Coding Regions of the Equine Genome. Hestand MS, et al. PLoS One, 2015. PMID 26107351, Free PMC Article
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc finger and BTB domain-containing protein 8B

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_002863925.1-RS_2024_08

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference EquCab3.0 Primary Assembly

    Genomic

    1. NC_009145.3 Reference EquCab3.0 Primary Assembly

      Range
      24392772..24414188 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003364415.4 → XP_003364463.2  zinc finger and BTB domain-containing protein 8B

      UniProtKB/TrEMBL
      F6VA78
      Related
      ENSECAP00000006378.2, ENSECAT00000008505.3
      Conserved Domains (4) summary
      sd00017
      Location:374 → 394
      ZF_C2H2; C2H2 Zn finger [structural motif]
      pfam00651
      Location:48 → 156
      BTB; BTB/POZ domain
      pfam13465
      Location:387 → 411
      zf-H2C2_2; Zinc-finger double domain
      pfam13909
      Location:372 → 396
      zf-H2C2_5; C2H2-type zinc-finger domain
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials