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    HHIPL1 HHIP like 1 [ Sus scrofa (pig) ]

    Gene ID: 100625046, updated on 8-Mar-2024

    Summary

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    Gene symbol
    HHIPL1
    Gene description
    HHIP like 1
    See related
    Ensembl:ENSSSCG00000022794
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in lung (RPKM 3.5), ovary (RPKM 2.8) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See HHIPL1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 7 NC_010449.5 (120627491..120655484)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 7 NC_010449.4 (128241839..128263051)

    Chromosome 7 - NC_010449.5Genomic Context describing neighboring genes Neighboring gene cyclin K Neighboring gene coiled-coil domain containing 85C Neighboring gene cytochrome P450 family 46 subfamily A member 1 Neighboring gene EMAP like 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    HHIP-like protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010449.5 Reference Sscrofa11.1 Primary Assembly

      Range
      120627491..120655484
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021099689.1 → XP_020955348.1  HHIP-like protein 1

      UniProtKB/TrEMBL
      A0A8D1H284, I3LHD8
      Related
      ENSSSCP00000023484.2, ENSSSCT00000027310.4
      Conserved Domains (4) summary
      smart00202
      Location:680 → 783
      SR; Scavenger receptor Cys-rich
      pfam03024
      Location:42 → 189
      Folate_rec; Folate receptor family
      cl26464
      Location:580 → 690
      Atrophin-1; Atrophin-1 family
      cl26817
      Location:199 → 445
      GSDH; Glucose / Sorbosone dehydrogenase
    Nucleotide Protein
    Heading Accession and Version

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