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    ESRRG estrogen related receptor gamma [ Sus scrofa (pig) ]

    Gene ID: 100622056, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ESRRGprovided by VGNC
    Official Full Name
    estrogen related receptor gammaprovided by VGNC
    Primary source
    VGNC:VGNC:96289
    See related
    Ensembl:ENSSSCG00000010814
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Also known as
    ESRRG1
    Expression
    Biased expression in kidney (RPKM 2.3), psoas major muscle (RPKM 0.9) and 4 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See ESRRG in Genome Data Viewer
    Location:
    chromosome: 10
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 10 NC_010452.4 (6710615..7371419, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 10 NC_010452.3 (8646197..8720519, complement)

    Chromosome 10 - NC_010452.4Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L36a-like Neighboring gene uncharacterized LOC106505078 Neighboring gene potassium channel tetramerization domain containing 3 Neighboring gene usherin Neighboring gene G-patch domain containing 2 Neighboring gene spermatogenesis associated 17

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    Related articles in PubMed

    1. Characterization and functional analysis of porcine estrogen-related receptors and their alternative splicing variants. Yang F, et al. J Anim Sci, 2015 Sep. PMID 26440325
    2. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
    3. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article
    4. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear steroid receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables steroid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables zinc ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in regulation of DNA-templated transcription IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in retinoic acid receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    estrogen-related receptor gamma
    Names
    estrogen related receptor gamma 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010452.4 Reference Sscrofa11.1 Primary Assembly

      Range
      6710615..7371419 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021064111.1 → XP_020919770.1  estrogen-related receptor gamma isoform X3

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:219 → 438
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:104 → 200
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    2. XM_021064112.1 → XP_020919771.1  estrogen-related receptor gamma isoform X3

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:219 → 438
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:104 → 200
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    3. XM_021064110.1 → XP_020919769.1  estrogen-related receptor gamma isoform X3

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:219 → 438
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:104 → 200
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    4. XM_021064109.1 → XP_020919768.1  estrogen-related receptor gamma isoform X3

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:219 → 438
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:104 → 200
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    5. XM_021064108.1 → XP_020919767.1  estrogen-related receptor gamma isoform X3

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:219 → 438
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:104 → 200
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    6. XM_021064114.1 → XP_020919773.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    7. XM_021064122.1 → XP_020919781.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    8. XM_021064115.1 → XP_020919774.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    9. XM_021064119.1 → XP_020919778.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    10. XM_021064125.1 → XP_020919784.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    11. XM_021064127.1 → XP_020919786.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    12. XM_021064120.1 → XP_020919779.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    13. XM_021064124.1 → XP_020919783.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    14. XM_021064118.1 → XP_020919777.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    15. XM_021064113.1 → XP_020919772.1  estrogen-related receptor gamma isoform X4

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:219 → 438
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:104 → 200
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    16. XM_021064117.1 → XP_020919776.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    17. XM_021064116.1 → XP_020919775.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    18. XM_021064126.1 → XP_020919785.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    19. XM_021064128.1 → XP_020919787.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    20. XM_021064129.1 → XP_020919788.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    21. XM_021064107.1 → XP_020919766.1  estrogen-related receptor gamma isoform X2

      UniProtKB/TrEMBL
      A0A8D0JQA3, A0A8D0R6E4, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:237 → 456
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:122 → 218
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    22. XM_021064121.1 → XP_020919780.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    23. XM_021064131.1 → XP_020919790.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    24. XM_021064106.1 → XP_020919765.1  estrogen-related receptor gamma isoform X1

      UniProtKB/TrEMBL
      A0A0U2VPN4, A0A480ER62, A0A4X1TTX3, A0A8D0JHQ3
      Related
      ENSSSCP00000053415.2, ENSSSCT00000060504.3
      Conserved Domains (2) summary
      cd06946
      Location:237 → 456
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:122 → 218
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    25. XM_021064123.1 → XP_020919782.1  estrogen-related receptor gamma isoform X5

      UniProtKB/TrEMBL
      A0A480P2M0, A0A4X1TR92, A0A8D0JMM0, A0A8D0JQA3, A0A8D1XSD3
      Conserved Domains (2) summary
      cd06946
      Location:214 → 433
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
      cd07170
      Location:99 → 195
      NR_DBD_ERR; DNA-binding domain of estrogen related receptors (ERR) is composed of two C4-type zinc fingers

    26. XM_013980019.2 → XP_013835473.1  estrogen-related receptor gamma isoform X6

      Conserved Domains (1) summary
      cd06946
      Location:1 → 205
      NR_LBD_ERR; The ligand binding domain of estrogen receptor-related nuclear receptors
    Nucleotide Protein Strain
    Heading Accession and Version

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