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    PELI3 pellino E3 ubiquitin protein ligase family member 3 [ Sus scrofa (pig) ]

    Gene ID: 100519073, updated on 17-Aug-2024

    Summary

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    Official Symbol
    PELI3provided by VGNC
    Official Full Name
    pellino E3 ubiquitin protein ligase family member 3provided by VGNC
    Primary source
    VGNC:VGNC:91308
    See related
    Ensembl:ENSSSCG00000012944
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in ovary (RPKM 3.9), subcutaneous adipose (RPKM 3.2) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See PELI3 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 2 NC_010444.4 (5950552..5959786, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 2 NC_010444.3 (5025837..5036155, complement)

    Chromosome 2 - NC_010444.4Genomic Context describing neighboring genes Neighboring gene Bardet-Biedl syndrome 1 Neighboring gene dipeptidyl peptidase 3 Neighboring gene mitochondrial ribosomal protein L11 Neighboring gene neuronal PAS domain protein 4

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ubiquitin protein ligase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein K63-linked ubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of Toll signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    E3 ubiquitin-protein ligase pellino homolog 3
    Names
    E3 ubiquitin-protein ligase pellino homolog 3 pseudogene
    pellino homolog 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010444.4 Reference Sscrofa11.1 Primary Assembly

      Range
      5950552..5959786 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_013994053.2 → XP_013849507.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A480L492, A0A4X1TNC3, A0A8D1APB0
      Conserved Domains (1) summary
      pfam04710
      Location:37 → 469
      Pellino; Pellino

    2. XM_021082798.1 → XP_020938457.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8D1ASK6
      Conserved Domains (1) summary
      pfam04710
      Location:1 → 362
      Pellino

    3. XM_005660658.3 → XP_005660715.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X2

      UniProtKB/TrEMBL
      A0A4X1TL40, A0A8D1ASK6, K7GS70
      Related
      ENSSSCP00000030750.1, ENSSSCT00000033679.4
      Conserved Domains (1) summary
      pfam04710
      Location:37 → 445
      Pellino; Pellino

    4. XM_003122491.5 → XP_003122539.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X1

      UniProtKB/TrEMBL
      A0A480L492, A0A4X1TNC3, A0A8D1APB0
      Related
      ENSSSCP00000061137.1, ENSSSCT00000091380.2
      Conserved Domains (1) summary
      pfam04710
      Location:37 → 469
      Pellino; Pellino

    5. XM_021082795.1 → XP_020938454.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8D1ASK6
      Conserved Domains (1) summary
      pfam04710
      Location:1 → 362
      Pellino

    6. XM_021082797.1 → XP_020938456.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8D1ASK6
      Conserved Domains (1) summary
      pfam04710
      Location:1 → 362
      Pellino

    7. XM_021082796.1 → XP_020938455.1  E3 ubiquitin-protein ligase pellino homolog 3 isoform X3

      UniProtKB/TrEMBL
      A0A8D1ASK6
      Conserved Domains (1) summary
      pfam04710
      Location:1 → 362
      Pellino
    Nucleotide Protein
    Heading Accession and Version

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