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    SLC20A1 solute carrier family 20 member 1 [ Sus scrofa (pig) ]

    Gene ID: 100518065, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SLC20A1provided by VGNC
    Official Full Name
    solute carrier family 20 member 1provided by VGNC
    Primary source
    VGNC:VGNC:92970
    See related
    Ensembl:ENSSSCG00000032288
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Ubiquitous expression in spleen (RPKM 22.1), subcutaneous adipose (RPKM 19.0) and 8 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See SLC20A1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 3 NC_010445.4 (43844716..43860547, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003538984.1 (14940..29402)

    Chromosome 3 - NC_010445.4Genomic Context describing neighboring genes Neighboring gene cytoskeleton associated protein 2 like Neighboring gene 5'-nucleotidase domain containing 4 Neighboring gene uncharacterized LOC110259964 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 5

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables phosphate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in phosphate ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sodium-dependent phosphate transporter 1
    Names
    solute carrier family 20 (phosphate transporter), member 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010445.4 Reference Sscrofa11.1 Primary Assembly

      Range
      43844716..43860547 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021087022.1 → XP_020942681.1  sodium-dependent phosphate transporter 1 isoform X1

      UniProtKB/TrEMBL
      A0A8D0Z1B1
      Conserved Domains (2) summary
      COG0306
      Location:23 → 241
      PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]
      pfam01384
      Location:529 → 675
      PHO4; Phosphate transporter family

    2. XM_021087023.1 → XP_020942682.1  sodium-dependent phosphate transporter 1 isoform X2

      UniProtKB/TrEMBL
      A0A4X1V3Y6, A0A8D0Z1B1, A0A8D1W6R9, M3V824
      Related
      ENSSSCP00000057642.1, ENSSSCT00000059671.3
      Conserved Domains (2) summary
      COG0306
      Location:23 → 241
      PitA; Phosphate/sulfate permease [Inorganic ion transport and metabolism]
      pfam01384
      Location:520 → 666
      PHO4; Phosphate transporter family
    Nucleotide Protein Strain
    Heading Accession and Version

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