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    MYL4 myosin light chain 4 [ Sus scrofa (pig) ]

    Gene ID: 100516998, updated on 17-Aug-2024

    Summary

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    Official Symbol
    MYL4provided by VGNC
    Official Full Name
    myosin light chain 4provided by VGNC
    Primary source
    VGNC:VGNC:90516
    See related
    Ensembl:ENSSSCG00000017307
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in heart (RPKM 25.3) and mixtures (RPKM 1.3) See more
    Orthologs
    human mouse all
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    Genomic context

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    See MYL4 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    10
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 12 NC_010454.4 (16774655..16792213, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 12 NC_010454.3 (16798622..16815378, complement)

    Chromosome 12 - NC_010454.4Genomic Context describing neighboring genes Neighboring gene EF-hand calcium-binding domain-containing protein 13-like Neighboring gene integrin subunit beta 3 Neighboring gene cell division cycle 27 Neighboring gene KAT8 regulatory NSL complex subunit 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of myosin II complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    myosin light chain 4

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010454.4 Reference Sscrofa11.1 Primary Assembly

      Range
      16774655..16792213 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021066794.1 → XP_020922453.1  myosin light chain 4 isoform X1

      UniProtKB/Swiss-Prot
      F1RRT2
      UniProtKB/TrEMBL
      A0A480TV63
      Conserved Domains (1) summary
      cl25352
      Location:49 → 196
      EFh_PEF; The penta-EF hand (PEF) family

    2. XM_003131306.2 → XP_003131354.1  myosin light chain 4 isoform X1

      UniProtKB/Swiss-Prot
      F1RRT2
      UniProtKB/TrEMBL
      A0A480TV63
      Related
      ENSSSCP00000018340.3, ENSSSCT00000018843.3
      Conserved Domains (1) summary
      cl25352
      Location:49 → 196
      EFh_PEF; The penta-EF hand (PEF) family

    3. XM_013989917.2 → XP_013845371.1  myosin light chain 4 isoform X1

      UniProtKB/Swiss-Prot
      F1RRT2
      UniProtKB/TrEMBL
      A0A480TV63
      Conserved Domains (1) summary
      cl25352
      Location:49 → 196
      EFh_PEF; The penta-EF hand (PEF) family

    4. XM_013989919.2 → XP_013845373.1  myosin light chain 4 isoform X2

      Conserved Domains (2) summary
      PTZ00184
      Location:8 → 149
      PTZ00184; calmodulin; Provisional
      cd00051
      Location:87 → 148
      EFh; EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to ...
    Nucleotide Protein
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    F1RRT2.3 GenPept UniProtKB/Swiss-Prot:F1RRT2

    Gene LinkOut

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