U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    TMEM91 transmembrane protein 91 [ Sus scrofa (pig) ]

    Gene ID: 100511932, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    TMEM91
    Gene description
    transmembrane protein 91
    See related
    Ensembl:ENSSSCG00000057647
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Broad expression in ovary (RPKM 4.0), spleen (RPKM 2.3) and 6 other tissues See more
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See TMEM91 in Genome Data Viewer
    Location:
    chromosome: 6
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 6 NC_010448.4 (49366073..49372419)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) 6 NC_010448.3 (45159094..45165389)

    Chromosome 6 - NC_010448.4Genomic Context describing neighboring genes Neighboring gene transforming growth factor beta 1 Neighboring gene basic proline-rich protein-like Neighboring gene B9 domain containing 2 Neighboring gene exosome component 5 Neighboring gene branched chain keto acid dehydrogenase E1 subunit alpha

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Expression

    Go to the top of the page Help
    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    transmembrane protein 91

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010448.4 Reference Sscrofa11.1 Primary Assembly

      Range
      49366073..49372419
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_003355932.4 → XP_003355980.2  transmembrane protein 91 isoform X2

      UniProtKB/TrEMBL
      A0A8D0LMB5
      Conserved Domains (1) summary
      pfam04505
      Location:92 → 121
      CD225; Interferon-induced transmembrane protein

    2. XM_021094418.1 → XP_020950077.1  transmembrane protein 91 isoform X3

      UniProtKB/TrEMBL
      A0A8D0IZ27, A0A8D0LN54
      Conserved Domains (1) summary
      pfam04505
      Location:92 → 124
      CD225; Interferon-induced transmembrane protein

    3. XM_003127157.4 → XP_003127205.1  transmembrane protein 91 isoform X1

      UniProtKB/TrEMBL
      A0A4X1SLR6, A0A8D0R4T0, A0A8D1LSM2, F1RH85
      Related
      ENSSSCP00000003264.2, ENSSSCT00000003347.5
      Conserved Domains (1) summary
      pfam04505
      Location:92 → 157
      CD225; Interferon-induced transmembrane protein

    RNA

    1. XR_001303679.2 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials