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    AGFG1 ArfGAP with FG repeats 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100358680, updated on 10-Oct-2024

    Summary

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    Gene symbol
    AGFG1
    Gene description
    ArfGAP with FG repeats 1
    See related
    Ensembl:ENSOCUG00000010426
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See AGFG1 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 7 NC_067380.1 (4333404..4423592, complement)

    Chromosome 7 - NC_067380.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127491688 Neighboring gene solute carrier family 19 member 3 Neighboring gene angiomotin-like Neighboring gene uncharacterized LOC103348896 Neighboring gene uncharacterized LOC103348894

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067380.1 Chromosome 7 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables GTPase activator activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasmic vesicle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    arf-GAP domain and FG repeat-containing protein 1
    Names
    HIV-1 Rev binding protein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067380.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      4333404..4423592 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051849097.1 → XP_051705057.1  arf-GAP domain and FG repeat-containing protein 1 isoform X10

    2. XM_051849096.1 → XP_051705056.1  arf-GAP domain and FG repeat-containing protein 1 isoform X9

    3. XM_051849094.1 → XP_051705054.1  arf-GAP domain and FG repeat-containing protein 1 isoform X7

    4. XM_051849093.1 → XP_051705053.1  arf-GAP domain and FG repeat-containing protein 1 isoform X6

    5. XM_051849092.1 → XP_051705052.1  arf-GAP domain and FG repeat-containing protein 1 isoform X5

    6. XM_051849091.1 → XP_051705051.1  arf-GAP domain and FG repeat-containing protein 1 isoform X4

    7. XM_051849090.1 → XP_051705050.1  arf-GAP domain and FG repeat-containing protein 1 isoform X3

    8. XM_051849089.1 → XP_051705049.1  arf-GAP domain and FG repeat-containing protein 1 isoform X2

    9. XM_051849088.1 → XP_051705048.1  arf-GAP domain and FG repeat-containing protein 1 isoform X1

    10. XM_051849095.1 → XP_051705055.1  arf-GAP domain and FG repeat-containing protein 1 isoform X8

      UniProtKB/TrEMBL
      A0A5F9C4B6

    RNA

    1. XR_007920544.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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