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    SMPDL3A sphingomyelin phosphodiesterase acid like 3A [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100358362, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SMPDL3A
    Gene description
    sphingomyelin phosphodiesterase acid like 3A
    See related
    Ensembl:ENSOCUG00000001501
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SMPDL3A in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 12 NC_067385.1 (43956163..43979064, complement)

    Chromosome 12 - NC_067385.1Genomic Context describing neighboring genes Neighboring gene triadin Neighboring gene uncharacterized LOC103349878 Neighboring gene clavesin 2 Neighboring gene uncharacterized LOC127493154 Neighboring gene fatty acid binding protein 7 Neighboring gene cAMP-dependent protein kinase inhibitor beta

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067385.1 Chromosome 12 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables sphingomyelin phosphodiesterase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in sphingomyelin catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    acid sphingomyelinase-like phosphodiesterase 3a
    Names
    acid sphingomyelinase-like phosphodiesterase 3A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067385.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      43956163..43979064 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002714799.4 → XP_002714845.1  acid sphingomyelinase-like phosphodiesterase 3a

      UniProtKB/TrEMBL
      G1SFK1
      Related
      ENSOCUP00000001291.3
      Conserved Domains (2) summary
      cd00842
      Location:40 → 334
      MPP_ASMase; acid sphingomyelinase and related proteins, metallophosphatase domain
      pfam00149
      Location:77 → 295
      Metallophos; Calcineurin-like phosphoesterase
    Nucleotide Protein
    Heading Accession and Version

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