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    SFXN5 sideroflexin 5 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100358331, updated on 8-Mar-2024

    Summary

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    Gene symbol
    SFXN5
    Gene description
    sideroflexin 5
    See related
    Ensembl:ENSOCUG00000000837
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SFXN5 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    14
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 2 NC_067375.1 (113679201..113802296)

    Chromosome 2 - NC_067375.1Genomic Context describing neighboring genes Neighboring gene 40S ribosomal protein SA-like Neighboring gene RAB11 family interacting protein 5 Neighboring gene 60S ribosomal protein L23a Neighboring gene empty spiracles homeobox 1 Neighboring gene sepiapterin reductase

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067375.1 Chromosome 2 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables citrate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables monoatomic ion transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in citrate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in mitochondrial transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic ion transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in mitochondrial inner membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sideroflexin-5

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067375.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      113679201..113802296
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051837500.1 → XP_051693460.1  sideroflexin-5 isoform X4

    2. XM_002709756.4 → XP_002709802.1  sideroflexin-5 isoform X1

      UniProtKB/TrEMBL
      G1TXL2
      Related
      ENSOCUP00000021814.3
      Conserved Domains (1) summary
      pfam03820
      Location:34 → 342
      Mtc; Tricarboxylate carrier

    3. XM_017340676.2 → XP_017196165.1  sideroflexin-5 isoform X3

      Related
      ENSOCUP00000000730.4

    4. XM_051837495.1 → XP_051693455.1  sideroflexin-5 isoform X2

    RNA

    1. XR_007916081.1 RNA Sequence

    2. XR_007916080.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Molecular Biology Databases
    Research Materials