U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    ATAT1 alpha tubulin acetyltransferase 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100358006, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    ATAT1
    Gene description
    alpha tubulin acetyltransferase 1
    See related
    Ensembl:ENSOCUG00000002153
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See ATAT1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 12 NC_067385.1 (133066261..133082782, complement)

    Chromosome 12 - NC_067385.1Genomic Context describing neighboring genes Neighboring gene protein phosphatase 1 regulatory subunit 18 Neighboring gene DEAH-box helicase 16 Neighboring gene chromosome 12 C6orf136 homolog Neighboring gene mitochondrial ribosomal protein S18B Neighboring gene protein phosphatase 1 regulatory subunit 10 Neighboring gene ATP binding cassette subfamily F member 1 Neighboring gene proline rich 3

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_067385.1 Chromosome 12 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables tubulin N-acetyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in alpha-tubulin acetylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in microtubule IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    alpha-tubulin N-acetyltransferase 1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067385.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      133066261..133082782 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008262685.3 → XP_008260907.1  alpha-tubulin N-acetyltransferase 1 isoform X2

      Conserved Domains (1) summary
      pfam05301
      Location:79 → 190
      Mec-17; Touch receptor neuron protein Mec-17

    2. XM_002714357.4 → XP_002714403.1  alpha-tubulin N-acetyltransferase 1 isoform X1

      UniProtKB/TrEMBL
      G1SGX7
      Related
      ENSOCUP00000001858.2
      Conserved Domains (1) summary
      pfam05301
      Location:79 → 190
      Mec-17; Touch receptor neuron protein Mec-17

    3. XM_051854899.1 → XP_051710859.1  alpha-tubulin N-acetyltransferase 1 isoform X3

    4. XM_008262687.3 → XP_008260909.1  alpha-tubulin N-acetyltransferase 1 isoform X5

      Conserved Domains (1) summary
      pfam05301
      Location:79 → 190
      Mec-17; Touch receptor neuron protein Mec-17

    5. XM_002714356.4 → XP_002714402.1  alpha-tubulin N-acetyltransferase 1 isoform X4

      UniProtKB/TrEMBL
      A0A5F9CVP7
      Related
      ENSOCUP00000037836.1
      Conserved Domains (1) summary
      pfam05301
      Location:79 → 190
      Mec-17; Touch receptor neuron protein Mec-17
    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials