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    IFT140 intraflagellar transport 140 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100355837, updated on 8-Mar-2024

    Summary

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    Gene symbol
    IFT140
    Gene description
    intraflagellar transport 140
    See related
    Ensembl:ENSOCUG00000024268
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See IFT140 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    34
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026258049.1 (288454..376074)

    NW_026258049.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127486410 Neighboring gene Jupiter microtubule associated homolog 2 Neighboring gene cramped chromatin regulator homolog 1 Neighboring gene uncharacterized LOC127486409 Neighboring gene transmembrane protein 204 Neighboring gene telomere maintenance 2 Neighboring gene pentraxin 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026258049 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in intraciliary retrograde transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axoneme IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    part_of intraciliary transport particle A IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    intraflagellar transport protein 140 homolog
    Names
    intraflagellar transport 140 homolog

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026258049.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      288454..376074
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051830266.1 → XP_051686226.1  intraflagellar transport protein 140 homolog isoform X1

    2. XM_051830264.1 → XP_051686224.1  intraflagellar transport protein 140 homolog isoform X1

    3. XM_051830263.1 → XP_051686223.1  intraflagellar transport protein 140 homolog isoform X1

    4. XM_051830268.1 → XP_051686228.1  intraflagellar transport protein 140 homolog isoform X3

    5. XM_051830267.1 → XP_051686227.1  intraflagellar transport protein 140 homolog isoform X2

    6. XM_051830265.1 → XP_051686225.1  intraflagellar transport protein 140 homolog isoform X1

    7. XM_051830269.1 → XP_051686229.1  intraflagellar transport protein 140 homolog isoform X4

    Nucleotide Protein
    Heading Accession and Version

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