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    BCL11A BCL11 transcription factor A [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100355522, updated on 8-Mar-2024

    Summary

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    Gene symbol
    BCL11A
    Gene description
    BCL11 transcription factor A
    See related
    Ensembl:ENSOCUG00000023948
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See BCL11A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 2 NC_067375.1 (125967265..126067594)

    Chromosome 2 - NC_067375.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103347675 Neighboring gene mitochondrial import receptor subunit TOM5 homolog Neighboring gene poly(A) polymerase gamma Neighboring gene uncharacterized LOC127488598 Neighboring gene U6 spliceosomal RNA

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067375.1 Chromosome 2 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables DNA-binding transcription factor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in negative regulation of dendrite development IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    B-cell lymphoma/leukemia 11A
    Names
    B cell CLL/lymphoma 11A
    B-cell CLL/lymphoma 11A (zinc finger protein)
    BAF chromatin remodeling complex subunit BCL11A
    BCL11A, BAF complex component

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067375.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      125967265..126067594
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051838543.1 → XP_051694503.1  B-cell lymphoma/leukemia 11A isoform X4

    2. XM_051838546.1 → XP_051694506.1  B-cell lymphoma/leukemia 11A isoform X5

    3. XM_051838552.1 → XP_051694512.1  B-cell lymphoma/leukemia 11A isoform X7

    4. XM_051838528.1 → XP_051694488.1  B-cell lymphoma/leukemia 11A isoform X1

    5. XM_051838539.1 → XP_051694499.1  B-cell lymphoma/leukemia 11A isoform X3

    6. XM_051838549.1 → XP_051694509.1  B-cell lymphoma/leukemia 11A isoform X6

    7. XM_051838573.1 → XP_051694533.1  B-cell lymphoma/leukemia 11A isoform X9

    8. XM_051838562.1 → XP_051694522.1  B-cell lymphoma/leukemia 11A isoform X8

    9. XM_051838533.1 → XP_051694493.1  B-cell lymphoma/leukemia 11A isoform X2

    Nucleotide Protein
    Heading Accession and Version

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