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    SLC13A3 solute carrier family 13 member 3 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100355238, updated on 10-Oct-2024

    Summary

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    Gene symbol
    SLC13A3
    Gene description
    solute carrier family 13 member 3
    See related
    Ensembl:ENSOCUG00000017615
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SLC13A3 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (2271106..2326859)

    Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 2 member 10 Neighboring gene TP53 regulating kinase Neighboring gene uncharacterized LOC127490940 Neighboring gene osteoclast stimulatory transmembrane protein Neighboring gene small nucleolar RNA SNORD77

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables citrate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables sodium:dicarboxylate symporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables succinate transmembrane transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in citrate transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in monoatomic anion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    Na(+)/dicarboxylate cotransporter 3
    Names
    solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      2271106..2326859
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002721218.4 → XP_002721264.1  Na(+)/dicarboxylate cotransporter 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F9CZJ6, G1TE22
      Related
      ENSOCUP00000015128.3
      Conserved Domains (2) summary
      COG0471
      Location:43 → 569
      CitT; Di- and tricarboxylate transporter [Carbohydrate transport and metabolism]
      cd01115
      Location:45 → 561
      SLC13_permease; Permease SLC13 (solute carrier 13). The sodium/dicarboxylate cotransporter NaDC-1 has been shown to translocate Krebs cycle intermediates such as succinate, citrate, and alpha-ketoglutarate across plasma membranes rabbit, human, and rat kidney. It is ...

    2. XM_051844967.1 → XP_051700927.1  Na(+)/dicarboxylate cotransporter 3 isoform X2

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials