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    GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100353918, updated on 8-Mar-2024

    Summary

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    Gene symbol
    GALNT3
    Gene description
    polypeptide N-acetylgalactosaminyltransferase 3
    See related
    Ensembl:ENSOCUG00000004957
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See GALNT3 in Genome Data Viewer
    Location:
    chromosome: 7
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 7 NC_067380.1 (68347094..68401384)

    Chromosome 7 - NC_067380.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 1 subunit alpha Neighboring gene U6 spliceosomal RNA Neighboring gene uncharacterized LOC103348769 Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene translation initiation factor IF-2 Neighboring gene jupiter microtubule associated homolog 1-like Neighboring gene cysteine and serine rich nuclear protein 3

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067380.1 Chromosome 7 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Component Evidence Code Pubs
    located_in Golgi apparatus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polypeptide N-acetylgalactosaminyltransferase 3
    Names
    UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067380.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      68347094..68401384
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002712246.4 → XP_002712292.1  polypeptide N-acetylgalactosaminyltransferase 3

      See identical proteins and their annotated locations for XP_002712292.1

      UniProtKB/TrEMBL
      G1SMW5
      Related
      ENSOCUP00000004291.2
      Conserved Domains (4) summary
      cd02510
      Location:188 → 493
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      COG0463
      Location:184 → 479
      WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
      cd00161
      Location:507 → 629
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      pfam00652
      Location:506 → 627
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

    2. XM_008258695.3 → XP_008256917.1  polypeptide N-acetylgalactosaminyltransferase 3

      See identical proteins and their annotated locations for XP_008256917.1

      UniProtKB/TrEMBL
      G1SMW5
      Conserved Domains (4) summary
      cd02510
      Location:188 → 493
      pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
      COG0463
      Location:184 → 479
      WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
      cd00161
      Location:507 → 629
      RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
      pfam00652
      Location:506 → 627
      Ricin_B_lectin; Ricin-type beta-trefoil lectin domain
    Nucleotide Protein
    Heading Accession and Version

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