U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    SENP6 SUMO specific peptidase 6 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100353104, updated on 8-Mar-2024

    Summary

    Go to the top of the page Help
    Gene symbol
    SENP6
    Gene description
    SUMO specific peptidase 6
    See related
    Ensembl:ENSOCUG00000010714
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See SENP6 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    24
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 12 NC_067385.1 (93147027..93289319, complement)

    Chromosome 12 - NC_067385.1Genomic Context describing neighboring genes Neighboring gene interphotoreceptor matrix proteoglycan 1 Neighboring gene myosin VI Neighboring gene glycine cleavage system H protein, mitochondrial-like Neighboring gene filamin A interacting protein 1 Neighboring gene uncharacterized LOC103349802 Neighboring gene small nucleolar RNA SNORA28

    Genomic regions, transcripts, and products

    Go to the top of the page Help
    Genomic Sequence:
    NC_067385.1 Chromosome 12 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SUMO-specific endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein desumoylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of kinetochore assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of spindle assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    sentrin-specific protease 6
    Names
    SUMO1/sentrin specific peptidase 6

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067385.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      93147027..93289319 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051855513.1 → XP_051711473.1  sentrin-specific protease 6 isoform X4

    2. XM_051855512.1 → XP_051711472.1  sentrin-specific protease 6 isoform X4

    3. XM_051855510.1 → XP_051711470.1  sentrin-specific protease 6 isoform X2

    4. XM_051855511.1 → XP_051711471.1  sentrin-specific protease 6 isoform X3

    5. XM_051855509.1 → XP_051711469.1  sentrin-specific protease 6 isoform X1

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials