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    GDPD1 glycerophosphodiester phosphodiesterase domain containing 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100352793, updated on 6-Jun-2024

    Summary

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    Gene symbol
    GDPD1
    Gene description
    glycerophosphodiester phosphodiesterase domain containing 1
    See related
    Ensembl:ENSOCUG00000013113
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See GDPD1 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (26600876..26659645, complement)

    Chromosome 19 - NC_067392.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC103351533 Neighboring gene yippee like 2 Neighboring gene PHD finger-like domain-containing protein 5A Neighboring gene SMG8 nonsense mediated mRNA decay factor Neighboring gene proline rich 11 Neighboring gene uncharacterized LOC127484568

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067392.1 Chromosome 19 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lysophospholipase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphoric diester hydrolase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in N-acylethanolamine metabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in glycerophospholipid catabolic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    lysophospholipase D GDPD1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067392.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      26600876..26659645 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051824810.1 → XP_051680770.1  lysophospholipase D GDPD1 isoform X2

      UniProtKB/TrEMBL
      A0A5F9D5S6

    2. XM_051824809.1 → XP_051680769.1  lysophospholipase D GDPD1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5

    3. XM_051824808.1 → XP_051680768.1  lysophospholipase D GDPD1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5

    4. XM_051824806.1 → XP_051680766.1  lysophospholipase D GDPD1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5

    5. XM_051824805.1 → XP_051680765.1  lysophospholipase D GDPD1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5

    6. XM_051824807.1 → XP_051680767.1  lysophospholipase D GDPD1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5

    7. XM_051824804.1 → XP_051680764.1  lysophospholipase D GDPD1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5

    8. XM_008271200.3 → XP_008269422.1  lysophospholipase D GDPD1 isoform X1

      See identical proteins and their annotated locations for XP_008269422.1

      UniProtKB/TrEMBL
      A0A5F9D5S6, G1T4R5
      Conserved Domains (2) summary
      cd08612
      Location:14 → 310
      GDPD_GDE4; Glycerophosphodiester phosphodiesterase domain of mammalian glycerophosphodiester phosphodiesterase GDE4 and similar proteins
      pfam03009
      Location:45 → 302
      GDPD; Glycerophosphoryl diester phosphodiesterase family
    Nucleotide Protein
    Heading Accession and Version

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