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    RAD51B RAD51 paralog B [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100351948, updated on 10-Oct-2024

    Summary

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    Gene symbol
    RAD51B
    Gene description
    RAD51 paralog B
    See related
    Ensembl:ENSOCUG00000000597
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See RAD51B in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    21
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 20 NC_067393.1 (3488897..4146359, complement)

    Chromosome 20 - NC_067393.1Genomic Context describing neighboring genes Neighboring gene ZFP36 ring finger protein like 1 Neighboring gene uncharacterized LOC127484609 Neighboring gene uncharacterized LOC127484649 Neighboring gene uncharacterized LOC103351641 Neighboring gene non-histone chromosomal protein HMG-17-like Neighboring gene zinc finger FYVE-type containing 26 Neighboring gene retinol dehydrogenase 12

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067393.1 Chromosome 20 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP-dependent DNA damage sensor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in double-strand break repair via homologous recombination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of Rad51B-Rad51C-Rad51D-XRCC2 complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    DNA repair protein RAD51 homolog 2
    Names
    RAD51-like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067393.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      3488897..4146359 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051826341.1 → XP_051682301.1  DNA repair protein RAD51 homolog 2 isoform X2

    2. XM_051826338.1 → XP_051682298.1  DNA repair protein RAD51 homolog 2 isoform X1

    3. XM_051826340.1 → XP_051682300.1  DNA repair protein RAD51 homolog 2 isoform X1

    4. XM_051826345.1 → XP_051682305.1  DNA repair protein RAD51 homolog 2 isoform X6

    5. XM_051826343.1 → XP_051682303.1  DNA repair protein RAD51 homolog 2 isoform X4

    6. XM_051826348.1 → XP_051682308.1  DNA repair protein RAD51 homolog 2 isoform X8

    7. XM_002719555.4 → XP_002719601.1  DNA repair protein RAD51 homolog 2 isoform X8

      See identical proteins and their annotated locations for XP_002719601.1

      UniProtKB/TrEMBL
      A0A5F9CFZ7
      Conserved Domains (2) summary
      TIGR02238
      Location:24 → 342
      recomb_DMC1; meiotic recombinase Dmc1
      cd01123
      Location:83 → 343
      Rad51_DMC1_radA; Rad51_DMC1_radA,B. This group of recombinases includes the eukaryotic proteins RAD51, RAD55/57 and the meiosis-specific protein DMC1, and the archaeal proteins radA and radB. They are closely related to the bacterial RecA group. Rad51 proteins catalyze a ...

    8. XM_051826346.1 → XP_051682306.1  DNA repair protein RAD51 homolog 2 isoform X7

    9. XM_051826336.1 → XP_051682296.1  DNA repair protein RAD51 homolog 2 isoform X1

    10. XM_051826339.1 → XP_051682299.1  DNA repair protein RAD51 homolog 2 isoform X1

    11. XM_051826344.1 → XP_051682304.1  DNA repair protein RAD51 homolog 2 isoform X5

    12. XM_051826337.1 → XP_051682297.1  DNA repair protein RAD51 homolog 2 isoform X1

    13. XM_051826342.1 → XP_051682302.1  DNA repair protein RAD51 homolog 2 isoform X3

    14. XM_051826350.1 → XP_051682310.1  DNA repair protein RAD51 homolog 2 isoform X10

    15. XM_051826349.1 → XP_051682309.1  DNA repair protein RAD51 homolog 2 isoform X9

    Nucleotide Protein
    Heading Accession and Version

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