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    TTC8 tetratricopeptide repeat domain 8 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100350688, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TTC8
    Gene description
    tetratricopeptide repeat domain 8
    See related
    Ensembl:ENSOCUG00000015555
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See TTC8 in Genome Data Viewer
    Location:
    chromosome: 20
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 20 NC_067393.1 (16229528..16286316, complement)

    Chromosome 20 - NC_067393.1Genomic Context describing neighboring genes Neighboring gene forkhead box N3 Neighboring gene uncharacterized LOC127484594 Neighboring gene uncharacterized LOC103351671 Neighboring gene uncharacterized LOC103351674 Neighboring gene EMAP like 5

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067393.1 Chromosome 20 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in non-motile cilium assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of BBSome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ciliary basal body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in non-motile cilium IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    tetratricopeptide repeat protein 8

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067393.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      16229528..16286316 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051826186.1 → XP_051682146.1  tetratricopeptide repeat protein 8 isoform X5

    2. XM_002719609.4 → XP_002719655.2  tetratricopeptide repeat protein 8 isoform X1

    3. XM_051826185.1 → XP_051682145.1  tetratricopeptide repeat protein 8 isoform X4

    4. XM_002719610.4 → XP_002719656.2  tetratricopeptide repeat protein 8 isoform X2

    5. XM_051826184.1 → XP_051682144.1  tetratricopeptide repeat protein 8 isoform X3

    Nucleotide Protein
    Heading Accession and Version

    Gene LinkOut

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