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    VMA21 vacuolar ATPase assembly factor VMA21 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100350117, updated on 8-Mar-2024

    Summary

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    Gene symbol
    VMA21
    Gene description
    vacuolar ATPase assembly factor VMA21
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See VMA21 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259178.1 (1320532..1331797, complement)

    NW_026259178.1Genomic Context describing neighboring genes Neighboring gene elongation factor 1-alpha 1-like Neighboring gene uncharacterized LOC127487631 Neighboring gene histone acetyltransferase KAT2B-like Neighboring gene G protein-coupled receptor 50

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026259178 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in vacuolar proton-transporting V-type ATPase complex assembly IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vacuolar ATPase assembly integral membrane protein VMA21
    Names
    VMA21 vacuolar H+-ATPase homolog
    VMA21, vacuolar ATPase assembly factor

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026259178.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      1320532..1331797 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008275024.3 → XP_008273246.1  vacuolar ATPase assembly integral membrane protein VMA21 isoform X1

      Conserved Domains (1) summary
      pfam09446
      Location:44 → 107
      VMA21; VMA21-like domain

    2. XM_017350867.2 → XP_017206356.1  vacuolar ATPase assembly integral membrane protein VMA21 isoform X1

      Conserved Domains (1) summary
      pfam09446
      Location:44 → 107
      VMA21; VMA21-like domain

    3. XM_002721327.4 → XP_002721373.1  vacuolar ATPase assembly integral membrane protein VMA21 isoform X2

      Conserved Domains (1) summary
      pfam09446
      Location:25 → 88
      VMA21; VMA21-like domain
    Nucleotide Protein
    Heading Accession and Version

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