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    SMARCD2 SWI/SNF related BAF chromatin remodeling complex subunit D2 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100350037, updated on 20-Sep-2024

    Summary

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    Gene symbol
    SMARCD2
    Gene description
    SWI/SNF related BAF chromatin remodeling complex subunit D2
    See related
    Ensembl:ENSOCUG00000004337
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SMARCD2 in Genome Data Viewer
    Location:
    chromosome: 19
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 19 NC_067392.1 (46192300..46200986, complement)

    Chromosome 19 - NC_067392.1Genomic Context describing neighboring genes Neighboring gene FtsJ RNA 2'-O-methyltransferase 3 Neighboring gene proteasome 26S subunit, ATPase 5 Neighboring gene intercellular adhesion molecule 5 Neighboring gene somatotropin

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067392.1 Chromosome 19 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2
    Names
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067392.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      46192300..46200986 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002719478.4 → XP_002719524.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 2

      UniProtKB/TrEMBL
      G1SLK6
      Related
      ENSOCUP00000003746.3
      Conserved Domains (2) summary
      COG5531
      Location:231 → 426
      Rsc6; Chromatin remodeling complex protein RSC6, contains SWIB domain [Chromatin structure and dynamics]
      pfam02201
      Location:311 → 382
      SWIB; SWIB/MDM2 domain
    Nucleotide Protein
    Heading Accession and Version

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