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    B3GALT2 beta-1,3-galactosyltransferase 2 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100348508, updated on 8-Mar-2024

    Summary

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    Gene symbol
    B3GALT2
    Gene description
    beta-1,3-galactosyltransferase 2
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See B3GALT2 in Genome Data Viewer
    Location:
    chromosome: 16
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 16 NC_067389.1 (7934613..7945304, complement)

    Chromosome 16 - NC_067389.1Genomic Context describing neighboring genes Neighboring gene Ro60, Y RNA binding protein Neighboring gene glutaredoxin 2 Neighboring gene cell division cycle 73 Neighboring gene putative tRNA (cytidine(32)/guanosine(34)-2'-O)-methyltransferase Neighboring gene uncharacterized LOC127483507

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067389.1 Chromosome 16 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables UDP-galactose:beta-N-acetylglucosamine beta-1,3-galactosyltransferase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein glycosylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    beta-1,3-galactosyltransferase 2
    Names
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase 2
    UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067389.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      7934613..7945304 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008268723.3 → XP_008266945.1  beta-1,3-galactosyltransferase 2

      UniProtKB/TrEMBL
      G1SFR0
      Conserved Domains (1) summary
      pfam01762
      Location:165 → 359
      Galactosyl_T; Galactosyltransferase
    Nucleotide Protein
    Heading Accession and Version

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