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    SMARCD3 SWI/SNF related BAF chromatin remodeling complex subunit D3 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100345769, updated on 20-Sep-2024

    Summary

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    Gene symbol
    SMARCD3
    Gene description
    SWI/SNF related BAF chromatin remodeling complex subunit D3
    See related
    Ensembl:ENSOCUG00000000249
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See SMARCD3 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    17
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 13 NC_067386.1 (12970868..13006901, complement)

    Chromosome 13 - NC_067386.1Genomic Context describing neighboring genes Neighboring gene ATP binding cassette subfamily F member 2 Neighboring gene chondroitin polymerizing factor 2 Neighboring gene microRNA mir-671 Neighboring gene 60S ribosomal protein L4-like Neighboring gene negative regulator of ubiquitin like proteins 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067386.1 Chromosome 13 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in regulation of transcription by RNA polymerase II IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SWI/SNF complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3
    Names
    SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067386.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      12970868..13006901 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_017345664.2 → XP_017201153.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2

      Related
      ENSOCUP00000028936.1

    2. XM_051858347.1 → XP_051714307.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X2

    3. XM_002715057.4 → XP_002715103.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X3

      See identical proteins and their annotated locations for XP_002715103.1

      UniProtKB/TrEMBL
      A0A5F9DR41, G1SCX1
      Related
      ENSOCUP00000000217.3
      Conserved Domains (1) summary
      cd17676
      Location:265 → 338
      SWIB_BAF60C; SWIB domain found in BRG1-associated factor 60C (BAF60C) and similar proteins

    4. XM_017345663.2 → XP_017201152.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X1

      UniProtKB/TrEMBL
      A0A5F9DR41
      Conserved Domains (1) summary
      cd17676
      Location:277 → 350
      SWIB_BAF60C; SWIB domain found in BRG1-associated factor 60C (BAF60C) and similar proteins

    5. XM_051858349.1 → XP_051714309.1  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3 isoform X4

    Nucleotide Protein
    Heading Accession and Version

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