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    TNPO1 transportin 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100343169, updated on 8-Mar-2024

    Summary

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    Gene symbol
    TNPO1
    Gene description
    transportin 1
    See related
    Ensembl:ENSOCUG00000013318
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See TNPO1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    27
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259169.1 (1425071..1516686)

    NW_026259169.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127487501 Neighboring gene histone H2B subacrosomal variant Neighboring gene uncharacterized LOC103352324 Neighboring gene FCH and mu domain containing endocytic adaptor 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026259169 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables nuclear import signal receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables nuclear localization sequence binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables small GTPase binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein import into nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    transportin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026259169.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      1425071..1516686
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051833248.1 → XP_051689208.1  transportin-1 isoform X1

    2. XM_051833251.1 → XP_051689211.1  transportin-1 isoform X2

    3. XM_051833249.1 → XP_051689209.1  transportin-1 isoform X2

    4. XM_051833250.1 → XP_051689210.1  transportin-1 isoform X2

    RNA

    1. XR_007914357.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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    Research Materials