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    PABPC1 poly(A) binding protein cytoplasmic 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100342434, updated on 8-Mar-2024

    Summary

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    Gene symbol
    PABPC1
    Gene description
    poly(A) binding protein cytoplasmic 1
    See related
    Ensembl:ENSOCUG00000004354
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See PABPC1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    15
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 3 NC_067376.1 (116079339..116093669, complement)

    Chromosome 3 - NC_067376.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat domain 46 Neighboring gene 39S ribosomal protein L35, mitochondrial-like Neighboring gene sorting nexin 31 Neighboring gene uncharacterized LOC127490603 Neighboring gene uncharacterized LOC127490604

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067376.1 Chromosome 3 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ribonucleoprotein complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    polyadenylate-binding protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067376.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      116079339..116093669 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008255797.3 → XP_008254019.1  polyadenylate-binding protein 1

      UniProtKB/TrEMBL
      A0A5F9CN86, G1TUR3
      Related
      ENSOCUP00000035105.1
      Conserved Domains (1) summary
      TIGR01628
      Location:11 → 615
      PABP-1234; polyadenylate binding protein, human types 1, 2, 3, 4 family
    Nucleotide Protein
    Heading Accession and Version

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