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    CLRN1 clarin 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100342214, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CLRN1
    Gene description
    clarin 1
    See related
    Ensembl:ENSOCUG00000013347
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See CLRN1 in Genome Data Viewer
    Location:
    chromosome: 14
    Exon count:
    3
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 14 NC_067387.1 (45953779..45995121, complement)

    Chromosome 14 - NC_067387.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127482878 Neighboring gene methylglutaconyl-CoA hydratase, mitochondrial-like Neighboring gene siah E3 ubiquitin protein ligase 2 Neighboring gene MINDY family member 4B Neighboring gene mediator complex subunit 12L Neighboring gene G protein-coupled receptor 171 Neighboring gene purinergic receptor P2Y14

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067387.1 Chromosome 14 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in equilibrioception IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in sensory perception of sound IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    clarin-1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067387.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      45953779..45995121 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002716269.4 → XP_002716315.1  clarin-1

      UniProtKB/TrEMBL
      G1T583
      Related
      ENSOCUP00000011488.1
    Nucleotide Protein
    Heading Accession and Version

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