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    BNIP1 BCL2 interacting protein 1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100342023, updated on 8-Mar-2024

    Summary

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    Gene symbol
    BNIP1
    Gene description
    BCL2 interacting protein 1
    See related
    Ensembl:ENSOCUG00000000040
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See BNIP1 in Genome Data Viewer
    Location:
    chromosome: 3
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 3 NC_067376.1 (54049596..54086394)

    Chromosome 3 - NC_067376.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein L26 like 1 Neighboring gene ATPase H+ transporting V0 subunit e1 Neighboring gene CREB3 regulatory factor Neighboring gene NK2 homeobox 5 Neighboring gene stanniocalcin 2

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067376.1 Chromosome 3 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNAP receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of SNARE complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in endoplasmic reticulum IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    vesicle transport protein SEC20
    Names
    BCL2/adenovirus E1B 19kD interacting protein 1
    BCL2/adenovirus E1B 19kDa interacting protein 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067376.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      54049596..54086394
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002710383.4 → XP_002710429.1  vesicle transport protein SEC20

      UniProtKB/TrEMBL
      A0A5F9D8G6, G1SCG8
      Related
      ENSOCUP00000000037.2
      Conserved Domains (1) summary
      cd15865
      Location:132 → 224
      SNARE_SEC20; SNARE motif of SEC20

    RNA

    1. XR_516447.3 RNA Sequence

    2. XR_516449.3 RNA Sequence

    3. XR_007918557.1 RNA Sequence

    Nucleotide Protein
    Heading Accession and Version

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