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    FIP1L1 factor interacting with PAPOLA and CPSF1 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100341056, updated on 6-Jun-2024

    Summary

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    Gene symbol
    FIP1L1
    Gene description
    factor interacting with PAPOLA and CPSF1
    See related
    Ensembl:ENSOCUG00000000100
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See FIP1L1 in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    23
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259198.1 (775062..844891, complement)

    NW_026259198.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127487922 Neighboring gene uncharacterized LOC108175618 Neighboring gene ligand of numb-protein X 1 Neighboring gene uncharacterized LOC127487926 Neighboring gene sec1 family domain containing 2 Neighboring gene uncharacterized LOC127487924 Neighboring gene RAS like family 11 member B

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026259198 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mRNA cleavage and polyadenylation specificity factor complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    pre-mRNA 3'-end-processing factor FIP1
    Names
    FIP1 like 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026259198.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      775062..844891 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_051835053.1 → XP_051691013.1  pre-mRNA 3'-end-processing factor FIP1 isoform X13

    2. XM_051835047.1 → XP_051691007.1  pre-mRNA 3'-end-processing factor FIP1 isoform X2

      UniProtKB/TrEMBL
      A0A5F9DIB0

    3. XM_051835051.1 → XP_051691011.1  pre-mRNA 3'-end-processing factor FIP1 isoform X7

      UniProtKB/TrEMBL
      A0A5F9DIB0

    4. XM_051835046.1 → XP_051691006.1  pre-mRNA 3'-end-processing factor FIP1 isoform X1

      UniProtKB/TrEMBL
      A0A5F9DIB0

    5. XM_051835050.1 → XP_051691010.1  pre-mRNA 3'-end-processing factor FIP1 isoform X6

      UniProtKB/TrEMBL
      A0A5F9C6V1, A0A5F9DIB0

    6. XM_051835048.1 → XP_051691008.1  pre-mRNA 3'-end-processing factor FIP1 isoform X3

      UniProtKB/TrEMBL
      A0A5F9DIB0

    7. XM_017337807.2 → XP_017193296.1  pre-mRNA 3'-end-processing factor FIP1 isoform X12

      UniProtKB/TrEMBL
      A0A5F9DIB0

    8. XM_051835052.1 → XP_051691012.1  pre-mRNA 3'-end-processing factor FIP1 isoform X8

      UniProtKB/TrEMBL
      A0A5F9DIB0

    9. XM_017337805.2 → XP_017193294.1  pre-mRNA 3'-end-processing factor FIP1 isoform X10

      UniProtKB/TrEMBL
      A0A5F9C729, A0A5F9DIB0
      Related
      ENSOCUP00000029576.1

    10. XM_002721784.4 → XP_002721830.2  pre-mRNA 3'-end-processing factor FIP1 isoform X9

      UniProtKB/TrEMBL
      A0A5F9DIB0, G1SCL2
      Related
      ENSOCUP00000000090.3
      Conserved Domains (1) summary
      pfam05182
      Location:154 → 196
      Fip1; Fip1 motif

    11. XM_017337802.2 → XP_017193291.1  pre-mRNA 3'-end-processing factor FIP1 isoform X5

      UniProtKB/TrEMBL
      A0A5F9DIB0

    12. XM_017337806.2 → XP_017193295.1  pre-mRNA 3'-end-processing factor FIP1 isoform X11

      UniProtKB/TrEMBL
      A0A5F9DDI9, A0A5F9DIB0
      Related
      ENSOCUP00000044288.1

    13. XM_051835049.1 → XP_051691009.1  pre-mRNA 3'-end-processing factor FIP1 isoform X4

      UniProtKB/TrEMBL
      A0A5F9DIB0
    Nucleotide Protein
    Heading Accession and Version

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