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    GJD2 gap junction protein delta 2 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100341036, updated on 8-Mar-2024

    Summary

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    Gene symbol
    GJD2
    Gene description
    gap junction protein delta 2
    See related
    Ensembl:ENSOCUG00000024560
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See GJD2 in Genome Data Viewer
    Location:
    chromosome: 17
    Exon count:
    2
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 17 NC_067390.1 (38493913..38498233)

    Chromosome 17 - NC_067390.1Genomic Context describing neighboring genes Neighboring gene serine/threonine-protein phosphatase 4 regulatory subunit 2-like Neighboring gene uncharacterized LOC103351145 Neighboring gene actin alpha cardiac muscle 1 Neighboring gene U6 spliceosomal RNA Neighboring gene 60S ribosomal protein L37a-like

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_067390.1 Chromosome 17 Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Cx36 expression in the AII-mediated rod pathway is activity dependent in the developing rabbit retina. Tu HY, et al. Dev Neurobiol, 2016 May. PMID 26084632
    2. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
    3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Study suggests that Cx36 (GJD2) expression in the AII-mediated rod pathway is activity dependent in the developing rabbit retina
      Title: Cx36 expression in the AII-mediated rod pathway is activity dependent in the developing rabbit retina.
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in cell communication IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of connexin complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    gap junction delta-2 protein
    Names
    gap junction protein, delta 2, 36kDa

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067390.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      38493913..38498233
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002718001.4 → XP_002718047.1  gap junction delta-2 protein

      UniProtKB/TrEMBL
      A0A654IF14, G1TT25
      Related
      ENSOCUP00000020195.1
      Conserved Domains (3) summary
      smart00037
      Location:45 → 77
      CNX; Connexin homologues
      smart01089
      Location:209 → 275
      Connexin_CCC; Gap junction channel protein cysteine-rich domain
      pfam00029
      Location:3 → 277
      Connexin; Connexin
    Nucleotide Protein
    Heading Accession and Version

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