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    CHMP2A charged multivesicular body protein 2A [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100340798, updated on 8-Mar-2024

    Summary

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    Gene symbol
    CHMP2A
    Gene description
    charged multivesicular body protein 2A
    See related
    Ensembl:ENSOCUG00000016621
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    human mouse all
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    Genomic context

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    See CHMP2A in Genome Data Viewer
    Location:
    chromosome: Un
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) Unplaced Scaffold NW_026259206.1 (1493857..1497332, complement)

    NW_026259206.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC127488014 Neighboring gene tripartite motif containing 28 Neighboring gene ubiquitin conjugating enzyme E2 M Neighboring gene myeloid zinc finger 1

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NW_026259206 Unplaced Scaffold Reference UM_NZW_1.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in endosome transport via multivesicular body sorting pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in late endosome to vacuole transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in protein transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of ESCRT III complex IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in multivesicular body IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    charged multivesicular body protein 2a
    Names
    chromatin modifying protein 2A

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NW_026259206.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      1493857..1497332 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008249035.3 → XP_008247257.1  charged multivesicular body protein 2a

      See identical proteins and their annotated locations for XP_008247257.1

      UniProtKB/TrEMBL
      G1TC07
      Related
      ENSOCUP00000014287.2
      Conserved Domains (1) summary
      pfam03357
      Location:17 → 185
      Snf7; Snf7

    2. XM_002721899.4 → XP_002721945.1  charged multivesicular body protein 2a

      See identical proteins and their annotated locations for XP_002721945.1

      UniProtKB/TrEMBL
      G1TC07
      Conserved Domains (1) summary
      pfam03357
      Location:17 → 185
      Snf7; Snf7
    Nucleotide Protein
    Heading Accession and Version

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