U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    CPSF6 cleavage and polyadenylation specific factor 6 [ Oryctolagus cuniculus (rabbit) ]

    Gene ID: 100340648, updated on 8-Mar-2024

    Summary

    Gene symbol
    CPSF6
    Gene description
    cleavage and polyadenylation specific factor 6
    See related
    Ensembl:ENSOCUG00000013505
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Oryctolagus cuniculus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Leporidae; Oryctolagus
    Orthologs
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    See CPSF6 in Genome Data Viewer
    Location:
    chromosome: 4
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    RS_2023_02 current UM_NZW_1.0 (GCF_009806435.1) 4 NC_067377.1 (55737590..55771512)

    Chromosome 4 - NC_067377.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 35 member E3 Neighboring gene uncharacterized LOC103348324 Neighboring gene carboxypeptidase M Neighboring gene uncharacterized LOC103348325 Neighboring gene lysozyme C Neighboring gene uncharacterized LOC127491236

    Genomic regions, transcripts, and products

    Genomic Sequence:
    NC_067377.1 Chromosome 4 Reference UM_NZW_1.0 Primary Assembly

    General protein information

    Preferred Names
    cleavage and polyadenylation specificity factor subunit 6
    Names
    cleavage and polyadenylation specific factor 6, 68 kD subunit
    cleavage and polyadenylation specific factor 6, 68kDa

    NCBI Reference Sequences (RefSeq)

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: GCF_009806435.1-RS_2023_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference UM_NZW_1.0 Primary Assembly

    Genomic

    1. NC_067377.1 Reference UM_NZW_1.0 Primary Assembly

      Range
      55737590..55771512
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_008256768.3XP_008254990.1  cleavage and polyadenylation specificity factor subunit 6 isoform X1

      See identical proteins and their annotated locations for XP_008254990.1

      Conserved Domains (2) summary
      COG0724
      Location:9152
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12643
      Location:82158
      RRM_CFIm68; RNA recognition motif (RRM) found in pre-mRNA cleavage factor Im 68 kDa subunit (CFIm68 or CPSF6) and similar proteins
    2. XM_008256767.3XP_008254989.1  cleavage and polyadenylation specificity factor subunit 6 isoform X1

      See identical proteins and their annotated locations for XP_008254989.1

      Conserved Domains (2) summary
      COG0724
      Location:9152
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12643
      Location:82158
      RRM_CFIm68; RNA recognition motif (RRM) found in pre-mRNA cleavage factor Im 68 kDa subunit (CFIm68 or CPSF6) and similar proteins
    3. XM_008256769.3XP_008254991.1  cleavage and polyadenylation specificity factor subunit 6 isoform X2

      See identical proteins and their annotated locations for XP_008254991.1

      UniProtKB/TrEMBL
      G1T5I9
      Related
      ENSOCUP00000011614.3
      Conserved Domains (2) summary
      COG0724
      Location:9152
      RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
      cd12643
      Location:82158
      RRM_CFIm68; RNA recognition motif (RRM) found in pre-mRNA cleavage factor Im 68 kDa subunit (CFIm68 or CPSF6) and similar proteins
    4. XM_008256770.3XP_008254992.1  cleavage and polyadenylation specificity factor subunit 6 isoform X3

      See identical proteins and their annotated locations for XP_008254992.1

      Conserved Domains (1) summary
      cd12643
      Location:82158
      RRM_CFIm68; RNA recognition motif (RRM) found in pre-mRNA cleavage factor Im 68 kDa subunit (CFIm68 or CPSF6) and similar proteins
    5. XM_002711322.4XP_002711368.1  cleavage and polyadenylation specificity factor subunit 6 isoform X4

      See identical proteins and their annotated locations for XP_002711368.1

      Conserved Domains (1) summary
      cd12643
      Location:82158
      RRM_CFIm68; RNA recognition motif (RRM) found in pre-mRNA cleavage factor Im 68 kDa subunit (CFIm68 or CPSF6) and similar proteins